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BaseInfo

ncRNA ID	novel_osa_miR2088
Species	Oryza sativa
Class	miRNA
Genome position	Chr2:4512905-4512992 [-]
Reference genome	IRGSP-1.0
Source	SRR1849767;SRR1849769;SRR1849770;SRR1849773;SRR3123645;SRR3123646;SRR3234045;SRR5049784;SRR5049789;SRR1738223;SRR1738224;SRR1738226;SRR1738228
Length	23
Mature sequence(if miRNA)	1 - GCUCACUCCUCUUUCUGUCACCC - 23
Stem-loop(if miRNA)	--U        -   -         A     UGAU  C   C   A    UGACAGAA GAG AGUGAGCAC CGGCG    GG CGG AUA A    |||||||| ||| ||||||||| |||||    || ||| ||| A    ACUGUCUU CUC UCACUCGUG GCCGC    CC GCC UAU U CCC        U   C         C     ---U  U   C   C
Stem-loop sequence	UUGACAGAAGAGAGUGAGCACACGGCGUGAUGGCCGGCAUAAAAUCUAUCCCGUCCUCGCCGCGUGCUCACUCCUCUUUCUGUCACCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015756510.1	ncRNA:23   CCCACUGUCUUUCUCCUCACUCG   1   *||*||*|||||||||||||||* targets:3   AGGAGAGAGAAAGAGGAGUGAGA   25 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group BTB/POZ domain-containing protein NPY1 (LOC4347086), mRNA	BTB/POZ domain-containing protein NPY1(LOC4347086)	coding protein	psRNATarget
AK065475.1	ncRNA:23   CCCACUGUCUUUCUCCUCACUCG   1   *||*||*|||||||||||||||* targets:4   AGGAGAGAGAAAGAGGAGUGAGA   26 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:J013024N13, full insert sequence	NA	coding protein	psRNATarget
AK243212.1	ncRNA:23   CCCACUGUCUUUCUCCUCACUCG   1   *|*|||*|||||||||||*|||| targets:641   AGAUGAGAGAAAGAGGAGGGAGC   663 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J100042M20, full insert sequence	NA	coding protein	psRNATarget