Search result

BaseInfo

ncRNA ID novel_osa_miR2081
Species Oryza sativa
Class miRNA
Genome position Chr1:1159671-1159789 [-]
Reference genome IRGSP-1.0
Source SRR1849767
Length 24
Mature sequence(if miRNA) 1 - AUCGACUGAUACCUGGUACCCUGG - 24
Stem-loop(if miRNA) --CC      CU       GAGCUGAUACCUAGGUAUCAGGCCUUGGUACCUAGGUAUCA
    GGUACC  GGGUAUC                                         G
    ||||||  |||||||                                         G
    CCAUGG  UCCAUAG                                         U
GGUC      --       UCAGCUAUGGAUCCCCAUAGUCAGCUAUGGAUCCAUGGUUC
Stem-loop sequence CCGGUACCCUGGGUAUCGAGCUGAUACCUAGGUAUCAGGCCUUGGUACCUAGGUAUCAGGUCUUGGUACCUAGGUAUCGACUGAUACCCCUAGGUAUCGACUGAUACCUGGUACCCUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK107372.1
ncRNA:24   GGUCCCAUGGUCCAUAGUCAGCUA   1
  ||||||||||||||||||||||||
targets:566   CCAGGGUACCAGGUAUCAGUCGAU   589

0.0 Oryza sativa Japonica Group cDNA clone:002-127-B05, full insert sequence NA coding protein psRNATarget
AK107372.1
ncRNA:24   GGUCCCAUGGUCCAUAGUCAGCUA   1
  ||||||||||||||||||||||||
targets:703   CCAGGGUACCAGGUAUCAGUCGAU   726

0.0 Oryza sativa Japonica Group cDNA clone:002-127-B05, full insert sequence NA coding protein psRNATarget