ncRNA ID | novel_osa_miR2081 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr1:1159671-1159789 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1849767 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUCGACUGAUACCUGGUACCCUGG - 24 |
Stem-loop(if miRNA) |
--CC      CU       GAGCUGAUACCUAGGUAUCAGGCCUUGGUACCUAGGUAUCA     GGUACC  GGGUAUC                                         G     ||||||  |||||||                                         G     CCAUGG  UCCAUAG                                         U GGUC      --       UCAGCUAUGGAUCCCCAUAGUCAGCUAUGGAUCCAUGGUUC |
Stem-loop sequence | CCGGUACCCUGGGUAUCGAGCUGAUACCUAGGUAUCAGGCCUUGGUACCUAGGUAUCAGGUCUUGGUACCUAGGUAUCGACUGAUACCCCUAGGUAUCGACUGAUACCUGGUACCCUGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK107372.1 |
|
0.0 | Oryza sativa Japonica Group cDNA clone:002-127-B05, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK107372.1 |
|
0.0 | Oryza sativa Japonica Group cDNA clone:002-127-B05, full insert sequence | NA | coding protein | psRNATarget |