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BaseInfo

ncRNA ID	novel_osa_miR2066
Species	Oryza sativa
Class	miRNA
Genome position	Chr12:23312504-23312566 [-]
Reference genome	IRGSP-1.0
Source	SRR1849766
Length	24
Mature sequence(if miRNA)	40 - GCCUUUGUCAUUGAUAUGUGGACC - 63
Stem-loop(if miRNA)	--                U   GA          GCCUUUGUCAUUGAUA GUG  CCUGAUGU   |||||||||||||||| |||  |||||||G   CGGAAACAGUGAUUAU UAC  GGGCUGCU UA                U   UC
Stem-loop sequence	GCCUUUGUCAUUGAUAUGUGGACCUGAUGUGUCGUCGGGCUCAUUUAUUAGUGACAAAGGCAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK119370.1	ncRNA:24   CCAGGUGUAUAGUUACUGUUUCCG   1   ||*=|||||=|||||||||||||| targets:1791   GGCUCACAUGUCAAUGACAAAGGC   1814 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:001-131-H09, full insert sequence	NA	coding protein	psRNATarget
XM_015783774.1	ncRNA:24   CCAGGUGUAUAGUUACUGUUUCCG   1   **|*=|||||||||||||||*||= targets:1891   CCUGUACAUAUCAAUGACAAUGGU   1914 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group putative disease resistance RPP13-like protein 3 (LOC4339112), transcript variant X1, mRNA	putative disease resistance RPP13-like protein 3(LOC4339112)	coding protein	psRNATarget
XM_015783775.1	ncRNA:24   CCAGGUGUAUAGUUACUGUUUCCG   1   **|*=|||||||||||||||*||= targets:1909   CCUGUACAUAUCAAUGACAAUGGU   1932 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group putative disease resistance RPP13-like protein 3 (LOC4339112), transcript variant X2, mRNA	putative disease resistance RPP13-like protein 3(LOC4339112)	coding protein	psRNATarget
XM_015793394.1	ncRNA:24   CCAGGUGUAUAGUUACUGUUUCCG   1   |||=*|||*|*||||||||||||* targets:1341   GGUUAACAAACCAAUGACAAAGGA   1364 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group putative disease resistance RPP13-like protein 3 (LOC107276515), transcript variant X2, mRNA	putative disease resistance RPP13-like protein 3(LOC107276515)	coding protein	psRNATarget
XM_015793393.1	ncRNA:24   CCAGGUGUAUAGUUACUGUUUCCG   1   |||=*|||*|*||||||||||||* targets:1413   GGUUAACAAACCAAUGACAAAGGA   1436 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group putative disease resistance RPP13-like protein 3 (LOC107276515), transcript variant X1, mRNA	putative disease resistance RPP13-like protein 3(LOC107276515)	coding protein	psRNATarget