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BaseInfo

ncRNA ID novel_osa_miR2065
Species Oryza sativa
Class miRNA
Genome position Chr12:24344455-24344535 [-]
Reference genome IRGSP-1.0
Source SRR1849766;SRR1849776;SRR1849781;SRR5049779;SRR5049781;SRR5049785;SRR5049786;SRR5049788
Length 24
Mature sequence(if miRNA) 1 - AAUGAUCGGAAAUGAUUUGGUACC - 24
Stem-loop(if miRNA) --                              C   -  AA
  UACCAAAUCGUUUCCGAUCGUUGGAUCUAG UGG GU  G
  |||||||||||||||||||||||||||||| ||| ||  A
  AUGGUUUAGUAAAGGCUAGUAACCUAGAUU AUC CG  U
CC                              -   A  GG
Stem-loop sequence UACCAAAUCGUUUCCGAUCGUUGGAUCUAGCUGGGUAAGAUGGGCACUAUUAGAUCCAAUGAUCGGAAAUGAUUUGGUACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ236460.1
ncRNA:22   AUGGUUUAGUAAAGGCUAGUAA   1
  |||=|||||||||||||||=||
targets:1   UACUAAAUCAUUUCCGAUCGUU   22

2.5 Sequence 2455 from Patent EP2985353 NA coding protein psRNATarget
JB164791.1
ncRNA:22   AUGGUUUAGUAAAGGCUAGUAA   1
  |||=|||||||||||||||=||
targets:1   UACUAAAUCAUUUCCGAUCGUU   22

2.5 Sequence 2455 from Patent EP2559767 NA coding protein psRNATarget
HI404330.1
ncRNA:22   AUGGUUUAGUAAAGGCUAGUAA   1
  |||=|||||||||||||||=||
targets:1   UACUAAAUCAUUUCCGAUCGUU   22

2.5 Sequence 2455 from Patent EP2074227 NA coding protein psRNATarget