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BaseInfo

ncRNA ID	novel_osa_miR2063
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:31044032-31044176 [+]
Reference genome	IRGSP-1.0
Source	SRR1849766;SRR1849781;SRR2040402;SRR3085192;SRR1738211
Length	24
Mature sequence(if miRNA)	122 - AACGUAGGAUUUUGAUAGAAAUGU - 145
Stem-loop(if miRNA)	--                                  C          U      G U         CCCUUA   AUUUCUGUCAGAAUCCUAUGUUUUUCCUAUUCUU UGUUUUUUCA UCCUGU A UCAAAGGGG      G   |||||||||||||||||||||||||||||||||| |||||||||| |||||| | |||||||||      U   UAAAGAUAGUUUUAGGAUGCAAAAAGGAUAAGGA GCAAAAGAGU AGGACG U AGUUUCCCC      U UG                                  U          U      G U         ACUUUC
Stem-loop sequence	AUUUCUGUCAGAAUCCUAUGUUUUUCCUAUUCUUCUGUUUUUUCAUUCCUGUGAUUCAAAGGGGCCCUUAGUUCUUUCACCCCUUUGAUUGGCAGGAUUGAGAAAACGUAGGAAUAGGAAAAACGUAGGAUUUUGAUAGAAAUGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015775044.1	ncRNA:24   UGUAAAGAUAGUUUUAGGAUGCAA   1   |=|||||||||||||||||||||| targets:789   AUAUUUCUAUCAAAAUCCUACGUU   812 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group two pore potassium channel a (LOC4334137), transcript variant X3, mRNA	two pore potassium channel a(LOC4334137)	coding protein	psRNATarget
XM_015775042.1	ncRNA:24   UGUAAAGAUAGUUUUAGGAUGCAA   1   |=|||||||||||||||||||||| targets:789   AUAUUUCUAUCAAAAUCCUACGUU   812 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group two pore potassium channel a (LOC4334137), transcript variant X1, mRNA	two pore potassium channel a(LOC4334137)	coding protein	psRNATarget
AK288975.1	ncRNA:24   UGUAAAGAUAGUUUUAGGAUGCAA   1   |=|*|*||||||||*||||||||| targets:155   AUAAUGCUAUCAAAUUCCUACGUU   178 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090085J12, full insert sequence	NA	coding protein	psRNATarget
XM_015760275.1	ncRNA:24   UGUAAAGAUAGUUUUAGGAUGCAA   1   *||||*|||**||||||||||||| targets:119   UCAUUCCUACAAAAAUCCUACGUU   142 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group disease resistance RPP13-like protein 4 (LOC4350886), mRNA	disease resistance RPP13-like protein 4(LOC4350886)	coding protein	psRNATarget