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BaseInfo

ncRNA ID novel_osa_miR2058
Species Oryza sativa
Class miRNA
Genome position Chr11:19527033-19527150 [-]
Reference genome IRGSP-1.0
Source SRR1849766;SRR1738227
Length 24
Mature sequence(if miRNA) 95 - GGGAACCAAUUUACUCAUGAUAGG - 118
Stem-loop(if miRNA) --                       GG         G -  A   AUCAAC    UAGUC
  GGGAACCAAUUUACUCAUGAUAG  ACAAUAAGA A CC GGA      CCAC     A
  |||||||||||||||||||||||  ||||||||| | || |||      ||||
  CCCUUGGUUAAAUGAGUACUAUC  UGUUGUUUU U GG CUU      GGUG     A
GG                       UA         G A  -   AAUCAA    UUGAG
Stem-loop sequence GGGAACCAAUUUACUCAUGAUAGGGACAAUAAGAGACCAGGAAUCAACCCACUAGUCAAGAGUUGUGGAACUAAUUCGGAUGUUUUGUUGUAUCUAUCAUGAGUAAAUUGGUUCCCGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015755936.1
ncRNA:24   GG-AUAGUACUCAUUUAACCAAGGG   1
  ||-|||||||*|||||||||||=||
targets:1471   CCAUAUCAUGUGUAAAUUGGUUUCC   1495

2.5 PREDICTED: Oryza sativa Japonica Group protein STRICTOSIDINE SYNTHASE-LIKE 10 (LOC4346905), mRNA protein STRICTOSIDINE SYNTHASE-LIKE 10(LOC4346905) coding protein psRNATarget