ncRNA ID | novel_osa_miR2058 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr11:19527033-19527150 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1849766;SRR1738227 |
Length | 24 |
Mature sequence(if miRNA) | 95 - GGGAACCAAUUUACUCAUGAUAGG - 118 |
Stem-loop(if miRNA) |
--                       GG         G -  A   AUCAAC    UAGUC   GGGAACCAAUUUACUCAUGAUAG  ACAAUAAGA A CC GGA      CCAC     A   |||||||||||||||||||||||  ||||||||| | || |||      ||||   CCCUUGGUUAAAUGAGUACUAUC  UGUUGUUUU U GG CUU      GGUG     A GG                       UA         G A  -   AAUCAA    UUGAG |
Stem-loop sequence | GGGAACCAAUUUACUCAUGAUAGGGACAAUAAGAGACCAGGAAUCAACCCACUAGUCAAGAGUUGUGGAACUAAUUCGGAUGUUUUGUUGUAUCUAUCAUGAGUAAAUUGGUUCCCGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015755936.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group protein STRICTOSIDINE SYNTHASE-LIKE 10 (LOC4346905), mRNA | protein STRICTOSIDINE SYNTHASE-LIKE 10(LOC4346905) | coding protein | psRNATarget |