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BaseInfo

ncRNA ID	novel_osa_miR2057
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:21620918-21621089 [+]
Reference genome	IRGSP-1.0
Source	SRR1849766;SRR1849767;SRR1849773;SRR1849774;SRR1849784;SRR2040380;SRR2040381;SRR2040382;SRR2040383;SRR2040386;SRR2040389;SRR2040391;SRR2040392;SRR2040393;SRR2040396;SRR2040397;SRR2040401;SRR2040408;SRR2040409
Length	24
Mature sequence(if miRNA)	1 - GUUUUCGCACCCAACUUUGAUCGU - 24
Stem-loop(if miRNA)	--G       AC                         -          ----AU        UUUU   -U        A   UAAAAUGU    UUUUCGC  CCAACUUUGAUCGUUCGUCUUAUUU AAAAUUUUUU      AAUUAGAA    CGU  GUUAUGAG UGA        G    |||||||  ||||||||||||||||||||||||| ||||||||||      ||||||||    |||  |||||||| |||    AAAAGCG  GGUUGAAACUGGUAGGCAGAAUAAA UUUUAAAAAA      UUAAUUUU    GUA  CAGUGCUC AUU        A CCA       CA                         C          AUUUUU        ---U   UU        -   UCAUGAUA
Stem-loop sequence	GUUUUCGCACCCAACUUUGAUCGUUCGUCUUAUUUAAAAUUUUUUAUAAUUAGAAUUUUCGUUGUUAUGAGAUGAUAAAAUGUGAAUAGUACUUUACUCGUGACUUAUGUUUUUAAUUUUUUUAAAAAAAUUUUCAAAUAAGACGGAUGGUCAAAGUUGGACGCGAAAAACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EF575786.1	ncRNA:24   UGCUAGUUUCAACCCACGCUUUUG   1   ||||*|||||||||||||*||||= targets:240   ACGACCAAAGUUGGGUGCUAAAAU   263 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) clone OSE-97-192-C12 unknown mRNA	NA	coding protein	psRNATarget
AK105921.1	ncRNA:24   UGCUAGUUUCAACCCACGCUUUUG   1   ||||*|||||||||||||*||||= targets:1204   ACGACCAAAGUUGGGUGCUAAAAU   1227 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:001-205-A04, full insert sequence	NA	coding protein	psRNATarget
AK060682.1	ncRNA:24   UGCUAGUUUCAACCCACGCUUUUG   1   ||||*|||||||||||||*||||= targets:1329   ACGACCAAAGUUGGGUGCUAAAAU   1352 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:001-029-E10, full insert sequence	NA	coding protein	psRNATarget
XM_015766935.1	ncRNA:24   UGCUAGUUUCAACCCACGCUUUUG   1   ||||*|||||||||||||*||||= targets:1332   ACGACCAAAGUUGGGUGCUAAAAU   1355 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4325311 (LOC4325311), mRNA	uncharacterized LOC4325311(LOC4325311)	coding protein	psRNATarget
AK072500.1	ncRNA:24   UGCUAGUUUCAACCCACGCUUUUG   1   ||||*|||||||||||||*||||= targets:1333   ACGACCAAAGUUGGGUGCUAAAAU   1356 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023127H12, full insert sequence	NA	coding protein	psRNATarget