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BaseInfo

ncRNA ID novel_osa_miR2054
Species Oryza sativa
Class miRNA
Genome position Chr10:18581277-18581399 [+]
Reference genome IRGSP-1.0
Source SRR1849766;SRR1849767;SRR1849768;SRR1849771;SRR1849772;SRR1849773;SRR1849774;SRR1849775;SRR2040396;SRR2040399;SRR2040402;SRR2040405
Length 21
Mature sequence(if miRNA) 103 - UAUCGCUUUGUUGGAUGAAGA - 123
Stem-loop(if miRNA) --             A    UU    C   G    C     GUAC         A       U
  UUCAUCCGAUAAA UGAU  GUAA AUU UUCA AAAAU    AUAUCUCUU UAUAGUU U
  ||||||||||||| ||||  |||| ||| |||| |||||    ||||||||| ||||||| A
  AAGUAGGUUGUUU GCUA  CAUU UAA AAGU UUUUA    UGUAGAGAG AUAUCAA U
AG             C    -U    A   -    A     --AA         A       A
Stem-loop sequence UUCAUCCGAUAAAAUGAUUUGUAACAUUGUUCACAAAAUGUACAUAUCUCUUAUAUAGUUUUAUAAACUAUAAGAGAGAUGUAAAUUUUAUGAAAAUAUUACUAUCGCUUUGUUGGAUGAAGA