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BaseInfo

ncRNA ID novel_osa_miR2036
Species Oryza sativa
Class miRNA
Genome position Chr11:27715850-27715899 [-]
Reference genome IRGSP-1.0
Source SRR1555746;SRR2040384;SRR2040397;SRR2097778;SRR2098560;SRR3123650;SRR1556014;SRR4407779;SRR1738210;SRR1738239
Length 21
Mature sequence(if miRNA) 1 - UGACCCCGUUCUCCUCGCCGG - 21
Stem-loop(if miRNA) --A        GC     C     G
   GUGAGGAG  CGGGG CGCUG A
   ||||||||  ||||| |||||
   CGCUCCUC  GCCCC GUGAC U
GGC        UU     A     C
Stem-loop sequence AGUGAGGAGGCCGGGGCCGCUGGAUCCAGUGACCCCGUUCUCCUCGCCGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015782267.1
ncRNA:21   GGCCGCUCCUCUUGCCCCAGU   1
  =||||||*||||*||||||||
targets:333   UCGGCGACGAGACCGGGGUCA   353

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized protein At4g28440 (LOC4338202), mRNA uncharacterized protein At4g28440(LOC4338202) coding protein psRNATarget
AK073979.1
ncRNA:21   GGCCGCUCCUCUUGCCCCAGU   1
  =||||||*||||*||||||||
targets:296   UCGGCGACGAGACCGGGGUCA   316

2.5 Oryza sativa Japonica Group cDNA clone:J033077H09, full insert sequence NA coding protein psRNATarget