ncRNA ID | novel_osa_miR2035 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr10:10219235-10219418 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1849766 |
Length | 24 |
Mature sequence(if miRNA) | 161 - ACUUGGAAACUAUCGUUGGAUCGA - 184 |
Stem-loop(if miRNA) |
--                             A       AAA                  A                G ----------A      C   ACUUGGAAACUAUCGUUGGAUCGAGAAAU GACGUCC   AUUCGUCCAUGUCACCAU AGUUAAAAUUUAACUC C           GAUUCA U   ||||||||||||||||||||||||||||| |||||||   |||||||||||||||||| |||||||||||||||| |           ||||||   UGAACCUUUGAUGGCAACCUAGCUCUUUA CUGCAGG   UAAGCAGGUGUAGUGGUA UCAAUUUUAAGUUGAG G           UUGAGU C UU                             C       CUC                  C                G CCAUUUUAAAA      A |
Stem-loop sequence | ACUUGGAAACUAUCGUUGGAUCGAGAAAUAGACGUCCAAAAUUCGUCCAUGUCACCAUAAGUUAAAAUUUAACUCGCAGAUUCACUCAUGAGUUAAAAUUUUACCGGGAGUUGAAUUUUAACUCAUGGUGAUGUGGACGAAUCUCGGACGUCCAUUUCUCGAUCCAACGGUAGUUUCCAAGUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK288582.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J090049I19, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK288232.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J090012P03, full insert sequence | NA | coding protein | psRNATarget |