ncRNA ID | novel_osa_miR2030 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr3:23382978-23383112 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1849766;SRR1849767;SRR1849771;SRR1849772;SRR1849778;SRR2040383;SRR2040384;SRR2040386;SRR2040387;SRR2040388;SRR2040390;SRR2040401;SRR2040406;SRR2040407;SRR2040410;SRR2857729;SRR2857732;SRR3123651;SRR1738240 |
Length | 24 |
Mature sequence(if miRNA) | 112 - AAGAAGAACUUUAUGUUGGCACUG - 135 |
Stem-loop(if miRNA) |
--                  G  C                                     -A   GU   AAGAAGAACUUUAUGUUG CA UGACUAAGCAUUUCUAGUUCAUAACACGGCUAAAUGG  UAU  U   |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||  |||   UUCUUCUUGAAAUACAGC GU ACUGAUUCGUAAAGAUCAAGUAUUGUGUCGAUUUACC  AUG  U GA                  G  A                                     CG   UG |
Stem-loop sequence | AAGAAGAACUUUAUGUUGGCACUGACUAAGCAUUUCUAGUUCAUAACACGGCUAAAUGGAUAUGUUUGUGUAGCCCAUUUAGCUGUGUUAUGAACUAGAAAUGCUUAGUCAAUGGCGACAUAAAGUUCUUCUUAG |