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BaseInfo

ncRNA ID	novel_osa_miR2027
Species	Oryza sativa
Class	miRNA
Genome position	Chr4:20401364-20401460 [+]
Reference genome	IRGSP-1.0
Source	SRR1298758;SRR2098557;SRR2098560;SRR1555751;SRR4407954;SRR4407955;SRR4407956;SRR4407960;SRR4407961;SRR4407962;SRR1556018;SRR1300837;SRR1654491
Length	24
Mature sequence(if miRNA)	1 - AAGCUAGUACUGGAUGGGACACAU - 24
Stem-loop(if miRNA)	--  G      C                      -             A   AA CUAGUA UGGAUGGGACACAUCCUAGGAC AUGAAUCUGGACA G   || |||||| |||||||||||||||||||||| |||||||||||||   UU GAUUAU AUCUAUCCUGUGUAGGAUCCUG UGCUUAGACCUGU C CA  G      A                      A             U
Stem-loop sequence	AAGCUAGUACUGGAUGGGACACAUCCUAGGACAUGAAUCUGGACAAGCUUGUCCAGAUUCGUAGUCCUAGGAUGUGUCCUAUCUAAUAUUAGGUUAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK100614.1	ncRNA:24   UACACAGGGUAGGUCAUGAUCGAA   1   ||*||||||||||||||||||*|| targets:1611   AUAUGUCCCAUCCAGUACUAGGUU   1634 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023108A15, full insert sequence	NA	coding protein	psRNATarget
XM_015783613.1	ncRNA:24   UACACAGGGUAGGUCAUGAUCGAA   1   ||*||||*|||||||||||||*|| targets:678   AUAUGUCACAUCCAGUACUAGAUU   701 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4339531 (LOC4339531), mRNA	uncharacterized LOC4339531(LOC4339531)	coding protein	psRNATarget
LQ236097.1	ncRNA:24   UACACAGGGUAGGUCAUGAUCGAA   1   ||*||||*|||||||||||||*|| targets:77   AUAUGUCACAUCCAGUACUAGAUU   100 Target Full Sequence	2.5	Sequence 2092 from Patent EP2985353	NA	coding protein	psRNATarget
JB164428.1	ncRNA:24   UACACAGGGUAGGUCAUGAUCGAA   1   ||*||||*|||||||||||||*|| targets:77   AUAUGUCACAUCCAGUACUAGAUU   100 Target Full Sequence	2.5	Sequence 2092 from Patent EP2559767	NA	coding protein	psRNATarget
HI403967.1	ncRNA:24   UACACAGGGUAGGUCAUGAUCGAA   1   ||*||||*|||||||||||||*|| targets:77   AUAUGUCACAUCCAGUACUAGAUU   100 Target Full Sequence	2.5	Sequence 2092 from Patent EP2074227	NA	coding protein	psRNATarget
HI404281.1	ncRNA:24   UACACAGGGUAGGUCAUGAUCGAA   1   ||*||||*|||||||||||||*|| targets:56   AUAUGUCACAUCCAGUACUAGAUU   79 Target Full Sequence	2.5	Sequence 2406 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236411.1	ncRNA:24   UACACAGGGUAGGUCAUGAUCGAA   1   ||*||||*|||||||||||||*|| targets:56   AUAUGUCACAUCCAGUACUAGAUU   79 Target Full Sequence	2.5	Sequence 2406 from Patent EP2985353	NA	coding protein	psRNATarget
JB164742.1	ncRNA:24   UACACAGGGUAGGUCAUGAUCGAA   1   ||*||||*|||||||||||||*|| targets:56   AUAUGUCACAUCCAGUACUAGAUU   79 Target Full Sequence	2.5	Sequence 2406 from Patent EP2559767	NA	coding protein	psRNATarget