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BaseInfo

ncRNA ID novel_osa_miR2026
Species Oryza sativa
Class miRNA
Genome position Chr10:10326497-10326555 [-]
Reference genome IRGSP-1.0
Source SRR1849766
Length 24
Mature sequence(if miRNA) 36 - AGAACGAAGUCAUCUCAAUCGGGC - 59
Stem-loop(if miRNA) --A A    A  -     -   U   GCCUA
   G ACGA GU CAUCU CAA CGG     A
   | |||| || ||||| ||| |||     A
   C UGCU CA GUAGA GUU GCC     A
AGA A    -  U     U   -   ACAUA
Stem-loop sequence AGAACGAAGUCAUCUCAAUCGGGCCUAAAAAUACACCGUUGUAGAUGUACUCGUACAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288447.1
ncRNA:24   CGGGCUAACUCUACUGAAGCAAGA   1
  ||||||||||||||||||||||||
targets:646   GCCCGAUUGAGAUGACUUCGUUCU   669

0.0 Oryza sativa Japonica Group cDNA, clone: J090034N03, full insert sequence NA coding protein psRNATarget