ncRNA ID | novel_osa_miR2011 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr9:14111023-14111232 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1849765;SRR1849767;SRR1849769;SRR1849771;SRR1849774;SRR1849775;SRR2040390 |
Length | 21 |
Mature sequence(if miRNA) | 190 - UGGCACGUCAUGUGGAUGAUG - 210 |
Stem-loop(if miRNA) |
--          U                        UUA               A        -C           -------A        ---C    --A    G   A   UGGCACGUCA GUGGAUGAUGACAUGGAUUUUUUU   UAUUUUUUCUCCCUU UUCUUUCU  UUUUCUCUUUU        UGAAAAGA    GAUG   CAUG ACG U   |||||||||| ||||||||||||||||||||||||   ||||||||||||||| ||||||||  |||||||||||        ||||||||    ||||   |||| |||   ACCGUGCGGU CACCUGCUACUGUACCUAAAAAAA   AUAAAAAAGAGGGAA AAGAAAGA  AAAAGAGAAAG        GCUUUUCU    UUAC   GUAC UGC G GC          U                        ---               G        AA           AAGGAACA        ACUU    GGA    G   A |
Stem-loop sequence | UGGCACGUCAUGUGGAUGAUGACAUGGAUUUUUUUUUAUAUUUUUUCUCCCUUAUUCUUUCUCUUUUCUCUUUUAUGAAAAGACGAUGACAUGGACGAUGACGUGCAUGAGGCAUUUUCAUCUUUUCGACAAGGAAGAAAGAGAAAAAAAGAAAGAAGAAGGGAGAAAAAAUAAAAAAAAUCCAUGUCAUCGUCCACUUGGCGUGCCACG |