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BaseInfo

ncRNA ID novel_osa_miR2011
Species Oryza sativa
Class miRNA
Genome position Chr9:14111023-14111232 [-]
Reference genome IRGSP-1.0
Source SRR1849765;SRR1849767;SRR1849769;SRR1849771;SRR1849774;SRR1849775;SRR2040390
Length 21
Mature sequence(if miRNA) 190 - UGGCACGUCAUGUGGAUGAUG - 210
Stem-loop(if miRNA) --          U                        UUA               A        -C           -------A        ---C    --A    G   A
  UGGCACGUCA GUGGAUGAUGACAUGGAUUUUUUU   UAUUUUUUCUCCCUU UUCUUUCU  UUUUCUCUUUU        UGAAAAGA    GAUG   CAUG ACG U
  |||||||||| ||||||||||||||||||||||||   ||||||||||||||| ||||||||  |||||||||||        ||||||||    ||||   |||| |||
  ACCGUGCGGU CACCUGCUACUGUACCUAAAAAAA   AUAAAAAAGAGGGAA AAGAAAGA  AAAAGAGAAAG        GCUUUUCU    UUAC   GUAC UGC G
GC          U                        ---               G        AA           AAGGAACA        ACUU    GGA    G   A
Stem-loop sequence UGGCACGUCAUGUGGAUGAUGACAUGGAUUUUUUUUUAUAUUUUUUCUCCCUUAUUCUUUCUCUUUUCUCUUUUAUGAAAAGACGAUGACAUGGACGAUGACGUGCAUGAGGCAUUUUCAUCUUUUCGACAAGGAAGAAAGAGAAAAAAAGAAAGAAGAAGGGAGAAAAAAUAAAAAAAAUCCAUGUCAUCGUCCACUUGGCGUGCCACG