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BaseInfo

ncRNA ID novel_osa_miR1997
Species Oryza sativa
Class miRNA
Genome position Chr8:9847504-9847641 [+]
Reference genome IRGSP-1.0
Source SRR1849765;SRR1849771;SRR1849773;SRR1849774;SRR1849775;SRR1555747;SRR2857728;SRR2857732;SRR2857733;SRR1556020;SRR1612403;SRR1654491
Length 22
Mature sequence(if miRNA) 1 - CGGAGCAGACGGGAUCUCGACC - 22
Stem-loop(if miRNA) --       GA     U               CA   C     A          C  U  C       U
  CGGAGCA  CGGGA CUCGACCUCGACAUC  UAU CCACU GAACUUGCUA CG UG CACUAUC U
  |||||||  ||||| |||||||||||||||  ||| ||||| |||||||||| || || |||||||
  GCCUCGU  GCCCU GAGCUGGAGCUGUAG  AUA GGUGA CUUGAACGAU GU AC GUGAUGG A
CG       GG     U               UC   A     G          A  U  A       U
Stem-loop sequence CGGAGCAGACGGGAUCUCGACCUCGACAUCCAUAUCCCACUAGAACUUGCUACCGUUGCCACUAUCUUAUGGUAGUGACAUUGAUAGCAAGUUCGAGUGGAAUACUGAUGUCGAGGUCGAGUUCCCGGGUGCUCCGGC