ncRNA ID | novel_osa_miR1997 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr8:9847504-9847641 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1849765;SRR1849771;SRR1849773;SRR1849774;SRR1849775;SRR1555747;SRR2857728;SRR2857732;SRR2857733;SRR1556020;SRR1612403;SRR1654491 |
Length | 22 |
Mature sequence(if miRNA) | 1 - CGGAGCAGACGGGAUCUCGACC - 22 |
Stem-loop(if miRNA) |
--       GA     U               CA   C     A          C  U  C       U   CGGAGCA  CGGGA CUCGACCUCGACAUC  UAU CCACU GAACUUGCUA CG UG CACUAUC U   |||||||  ||||| |||||||||||||||  ||| ||||| |||||||||| || || |||||||   GCCUCGU  GCCCU GAGCUGGAGCUGUAG  AUA GGUGA CUUGAACGAU GU AC GUGAUGG A CG       GG     U               UC   A     G          A  U  A       U |
Stem-loop sequence | CGGAGCAGACGGGAUCUCGACCUCGACAUCCAUAUCCCACUAGAACUUGCUACCGUUGCCACUAUCUUAUGGUAGUGACAUUGAUAGCAAGUUCGAGUGGAAUACUGAUGUCGAGGUCGAGUUCCCGGGUGCUCCGGC |