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BaseInfo

ncRNA ID	novel_osa_miR1991
Species	Oryza sativa
Class	miRNA
Genome position	Chr11:27727534-27727633 [+]
Reference genome	IRGSP-1.0
Source	SRR1555746;SRR1555749;SRR1555751;SRR2458631;SRR1556011;SRR1556014;SRR1556016;SRR4407954;SRR4407955;SRR4407956;SRR1556018;SRR1654491
Length	24
Mature sequence(if miRNA)	1 - AAGGAAUUUUGGUUGGAUGUGACA - 24
Stem-loop(if miRNA)	--              G       ------CACA                 GC   AAGGAAUUUUGGUU GAUGUGA          UACAACGAAUUUGGACG  A   |||||||||||||| |||||||          |||||||||||||||||   UUCCUUAAAACCAA CUACACU          AUGUUGUUUAGACCUGU  U UA              G       AUAUAAGAUC                 AC
Stem-loop sequence	AAGGAAUUUUGGUUGGAUGUGACACAUACAACGAAUUUGGACGGCAUCAUGUCCAGAUUUGUUGUACUAGAAUAUAUCACAUCGAACCAAAAUUCCUUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK243489.1	ncRNA:24   ACAGUGUAGGUUGGUUUUAAGGAA   1   ||||||||=||||||=|||||||| targets:2571   UGUCACAUUCAACCAGAAUUCCUU   2594 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J100073M12, full insert sequence	NA	coding protein	psRNATarget
AK288631.1	ncRNA:24   ACAGUGUAGGUUGGUUUUAAGGAA   1   |||||||||||||||||||*|||| targets:1341   UGUCACAUCCAACCAAAAUCCCUU   1364 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090055C12, full insert sequence	NA	coding protein	psRNATarget
AK120213.1	ncRNA:24   ACAGUGUAGGUUGGUUUUAAGGAA   1   |||||=|||||*|||||||||||| targets:1366   UGUCAUAUCCACCCAAAAUUCCUU   1389 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013039G14, full insert sequence	NA	coding protein	psRNATarget
AK109615.1	ncRNA:24   ACAGUGUAGGUUGGUUUUAAGGAA   1   ||||**|||||||||||||||=|| targets:1575   UGUCCAAUCCAACCAAAAUUCUUU   1598 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-137-G12, full insert sequence	NA	coding protein	psRNATarget
XM_015760168.1	ncRNA:24   ACAGUGUAGGUUGGUUUUAAGGAA   1   ||||**|||||||||||||||=|| targets:1575   UGUCCAAUCCAACCAAAAUUCUUU   1598 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4350559 (LOC4350559), mRNA	uncharacterized LOC4350559(LOC4350559)	coding protein	psRNATarget
AK107672.1	ncRNA:24   ACAGUGUAGGUUGGUUUUAAGGAA   1   **|||=||||||||||||||||*| targets:940   CAUCAUAUCCAACCAAAAUUCCCU   963 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-131-H10, full insert sequence	NA	coding protein	psRNATarget
AK288587.1	ncRNA:24   ACAGUGUAGGUUGGUUUUAAGGAA   1   *|||*=|||||||||||||*|||| targets:2191   GGUCUUAUCCAACCAAAAUCCCUU   2214 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090050A10, full insert sequence	NA	coding protein	psRNATarget