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BaseInfo

ncRNA ID	novel_osa_miR1983
Species	Oryza sativa
Class	miRNA
Genome position	Chr11:27186336-27186452 [+]
Reference genome	IRGSP-1.0
Source	SRR1555746;SRR1555747;SRR2097779;SRR2098557;SRR2098560;SRR2099745;SRR2458631;SRR1556011;SRR1556014;SRR4407775;SRR4407779;SRR4407962;SRR1556020
Length	24
Mature sequence(if miRNA)	1 - AAACUGCUAGACGAAUUUAUUAAG - 24
Stem-loop(if miRNA)	--AAAC   U          A            AAU    C   AUCA     UUAUU       UGC AGACGAAUUU UUAAGCCUAAUU   CCAU AUU    AAUGU     A       ||| |||||||||| ||||||||||||   |||| |||    |||||     U       ACG UCUGUUUAGA AAUUUGGAUUAA   GGUA UAG    UUACA     A CAUUUA   C          A            CGC    C   ACUG     CCACG
Stem-loop sequence	AAACUGCUAGACGAAUUUAUUAAGCCUAAUUAAUCCAUCAUUAUCAAAUGUUUAUUAUAGCACCACAUUGUCAGAUCAUGGCGCAAUUAGGUUUAAAAGAUUUGUCUCGCAAUUUAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288216.1	ncRNA:24   GAAUUAUUUAAGCAGAUCGUCAAA   1   ||||||||||||||||*||||||| targets:722   CUUAAUAAAUUCGUCUCGCAGUUU   745 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090011C22, full insert sequence	NA	coding protein	psRNATarget
XM_015769825.1	ncRNA:24   GAAUUAUUUAAGCAGAUCGUCAAA   1   ||||||||||||||||*||||||| targets:717   CUUAAUAAAUUCGUCUCGCAGUUU   740 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group BTB/POZ domain-containing protein At4g30940 (LOC4329965), mRNA	BTB/POZ domain-containing protein At4g30940(LOC4329965)	coding protein	psRNATarget
XM_015780200.1	ncRNA:24   GAAUUAUUUAAGCAGAUCGUCAAA   1   ||||||||||||||||*||||||| targets:41   CUUAAUAAAUUCGUCUCGCAGUUU   64 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At3g22150, chloroplastic (LOC4336891), mRNA	pentatricopeptide repeat-containing protein At3g22150, chloroplastic(LOC4336891)	coding protein	psRNATarget
AK288471.1	ncRNA:24   GAAUUAUUUAAGCAGAUCGUCAAA   1   ||||||||||||||||*||||||| targets:1773   CUUAAUAAAUUCGUCUCGCAGUUU   1796 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090037K14, full insert sequence	NA	coding protein	psRNATarget
AK288843.1	ncRNA:24   GAAUUAUUUAAGCAGAUCGUCAAA   1   ||||||||||||||||*||||||| targets:2213   CUUAAUAAAUUCGUCUCGCAGUUU   2236 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090074J10, full insert sequence	NA	coding protein	psRNATarget
AK067578.1	ncRNA:24   GAAUUAUUUAAGCAGAUCGUCAAA   1   ||||||||||||||||*||||||| targets:1760   CUUAAUAAAUUCGUCUCGCAGUUU   1783 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013110M15, full insert sequence	NA	coding protein	psRNATarget
AK119775.1	ncRNA:24   GAAUUAUUUAAGCAGAUCGUCAAA   1   ||||||||||||||||*||||||| targets:838   CUUAAUAAAUUCGUCUCGCAGUUU   861 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:002-172-G07, full insert sequence	NA	coding protein	psRNATarget
AK288184.1	ncRNA:24   GAAUUAUUUAAGCAGAUCGUCAAA   1   ||||||||||||||||*||||||| targets:957   CUUAAUAAAUUCGUCUCGCAGUUU   980 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090005P17, full insert sequence	NA	coding protein	psRNATarget
CT837782.1	ncRNA:24   GAAUUAUUUAAGCAGAUCGUCAAA   1   =|||||||||||||||*||||||| targets:1524   UUUAAUAAAUUCGUCUCGCAGUUU   1547 Target Full Sequence	1.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA244J06, full insert sequence	NA	coding protein	psRNATarget
CT837862.1	ncRNA:24   GAAUUAUUUAAGCAGAUCGUCAAA   1   |*||||||||||||||*||||||| targets:906   CCUAAUAAAUUCGUCUCGCAGUUU   929 Target Full Sequence	1.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA123J02, full insert sequence	NA	coding protein	psRNATarget