| ncRNA ID | novel_osa_miR1966 |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr3:30053404-30053604 [+] |
| Reference genome | IRGSP-1.0 |
| Source | SRR1849765 |
| Length | 22 |
| Mature sequence(if miRNA) | 180 - UUUUAUCGGUAAUCUACGUUUA - 201 |
| Stem-loop(if miRNA) |
-- U C CC A C G ------ ACAA AU AACGUAGAUU UUGA AAAAC AUUUCAUAACCUCUAG CUAUUUUGCGAGACGAAUCUAA GA GUAUAUUAAUCUAUGAUU UGCU UG G |||||||||| |||| ||||| |||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||| |||| || UUGCAUCUAA GGCU UUUUG UAAAGUAUUGGGGAUC GAUAAAACGCUCUGCUUAGAUU CU CAUAUAAUUAGGUACUAA ACGA AC U AU U A AC C A A UCACCG -AUG AU |
| Stem-loop sequence | AACGUAGAUUUUUGACAAAACCCAUUUCAUAACCUCUAGACUAUUUUGCGAGACGAAUCUAACGAGGUAUAUUAAUCUAUGAUUUGCUACAAUGAUGUUACAGUAAGCAGCCACUAAUCAUGGAUUAAUAUACAUCAUUAGAUUCGUCUCGCAAAAUAGCCUAGGGGUUAUGAAAUCAGUUUUAUCGGUAAUCUACGUUUA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK241271.1 |
|
1.5 | Oryza sativa Japonica Group cDNA, clone: J065132H24, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| XM_015790190.1 |
|
1.5 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107277841 (LOC107277841), mRNA | uncharacterized LOC107277841(LOC107277841) | coding protein | psRNATarget | |||||||||
| AK289169.1 |
|
2.0 | Oryza sativa Japonica Group cDNA, clone: J100010O11, full insert sequence | NA | coding protein | psRNATarget |