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BaseInfo

ncRNA ID novel_osa_miR1962
Species Oryza sativa
Class miRNA
Genome position Chr10:13511742-13511841 [-]
Reference genome IRGSP-1.0
Source SRR1849765;SRR1849766;SRR1849767;SRR1849768;SRR1849769;SRR1849770;SRR1849771;SRR1849772;SRR1849773;SRR1849774;SRR1849775;SRR1849776;SRR1849777;SRR1849778;SRR1849779;SRR1849780;SRR1849781;SRR1849782;SRR1849784;SRR1849786;SRR2857728;SRR2857731;SRR2857732;SRR2857733
Length 24
Mature sequence(if miRNA) 1 - AGUGGGAUACUGAUGUCGAGGUCG - 24
Stem-loop(if miRNA) --           CA         AU         C  U  C     UCU
  ACCUCGACAUC  UAUCCCACU  AACUUGCUA CG UG CACUA   U
  |||||||||||  |||||||||  ||||||||| || || |||||
  UGGAGCUGUAG  AUAGGGUGA  UUGAACGAU GU AC GUGAU   A
GC           UC         GC         A  U  A     UGU
Stem-loop sequence ACCUCGACAUCCAUAUCCCACUAUAACUUGCUACCGUUGCCACUAUCUUAUGUUAGUGACAUUGAUAGCAAGUUCGAGUGGGAUACUGAUGUCGAGGUCG