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BaseInfo

ncRNA ID novel_osa_miR1937
Species Oryza sativa
Class miRNA
Genome position Chr12:4638966-4639076 [+]
Reference genome IRGSP-1.0
Source SRR1849765;SRR5351738
Length 24
Mature sequence(if miRNA) 1 - GAUAAAGUGGUAGUAACAUUGUUC - 24
Stem-loop(if miRNA) --                                     AU          --   U
  GAUAAAGUGGUAGUAACAUUGUUCACAAAAUUUACAU  AUCUCUUAUA  GUU A
  |||||||||||||||||||||||||||||||||||||  ||||||||||  ||| U
  CUAUUUCACCAUCAUUGUAACAAGUGUUUUAAAUGUG  UAGAGAAUAU  CAA A
GG                                     --          AC   A
Stem-loop sequence GAUAAAGUGGUAGUAACAUUGUUCACAAAAUUUACAUAUAUCUCUUAUAGUUUAUAAAACCAUAUAAGAGAUGUGUAAAUUUUGUGAACAAUGUUACUACCACUUUAUCGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
CT831299.1
ncRNA:24   CUUGUUACAAUGAUGGUGAAAUAG   1
  ||||||||||||||=|||||||||
targets:891   GAACAAUGUUACUAUCACUUUAUC   914

1.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA205E03, full insert sequence NA coding protein psRNATarget
XM_015782248.1
ncRNA:24   CUUGUUACAAUGAUGGUGAAAUAG   1
  *|*|||||||*||||||||||||=
targets:553   UAUCAAUGUUCCUACCACUUUAUU   576

2.0 PREDICTED: Oryza sativa Japonica Group dirigent protein 22-like (LOC107280844), mRNA dirigent protein 22-like(LOC107280844) coding protein psRNATarget