ncRNA ID | novel_osa_miR1933 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr11:24821340-24821454 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1555746;SRR1555747;SRR1555749;SRR2097779;SRR2098557;SRR2098560;SRR2098822;SRR2099568;SRR2099745;SRR1556011;SRR1556014;SRR4407775;SRR4407779;SRR4407953;SRR4407954;SRR4407955;SRR4407956;SRR4407957;SRR4407958;SRR4407959;SRR4407960;SRR1556016;SRR4407961;SRR4407962;SRR1556020 |
Length | 24 |
Mature sequence(if miRNA) | 92 - AAUGUUACUAUUACUUUGUCGGAU - 115 |
Stem-loop(if miRNA) |
--   U     CG AUU           C C     G            A  C    U   CCG UAAAG  A   GUAACAUUAUU A AAAAU UACAUAUCUCUU UA AGUU A   ||| |||||  |   ||||||||||| | ||||| |||||||||||| || ||||   GGC GUUUC  U   CAUUGUAAUAA U UUUUA AUGUAUAGAGAG GU UCAA U UA   U     AU -AU           A A     A            A  A    A |
Stem-loop sequence | CCGUUAAAGCGAAUUGUAACAUUAUUCACAAAAUGUACAUAUCUCUUAUACAGUUUAUAAACUAUGAGAGAGAUAUGUAAAUUUUAUAAAUAAUGUUACUAUUACUUUGUCGGAU |