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BaseInfo

ncRNA ID	novel_osa_miR1932
Species	Oryza sativa
Class	miRNA
Genome position	Chr10:20888647-20888863 [+]
Reference genome	IRGSP-1.0
Source	SRR1849765;SRR1849766;SRR2040393;SRR2040399;SRR1738241
Length	24
Mature sequence(if miRNA)	194 - AAGGGCUACAAAUUUGAUAUAAUG - 217
Stem-loop(if miRNA)	--          A          C      AC          U        -------------------------A      UGAAUUAAAACUGUUUAGGGUCCCAAAAUAUUGUUGCA   UUAUAUCAAA UUGUAGCUCU GAUGCG  CUACAACUUU UAGUUGGA                          AGUUUU                                      U   |||||||||| |||||||||| ||||||  |||||||||| ||||||||                          ||||||   AAUAUAGUUU AACAUCGGGA CUGUGC  GAUGUUGAAA AUCAACUU                          CAGGGU                                      G GU          A          A      CA          C        AAAAAAAAAUAAAAUUCAGUAAAAAA      UUUACGUUAAAAUUUUAAUUUUAAAGUUUUAGAUAUUU
Stem-loop sequence	UUAUAUCAAAAUUGUAGCUCUCGAUGCGACCUACAACUUUUUAGUUGGAAAGUUUUUGAAUUAAAACUGUUUAGGGUCCCAAAAUAUUGUUGCAUGUUUAUAGAUUUUGAAAUUUUAAUUUUAAAAUUGCAUUUUGGGACAAAAAAUGACUUAAAAUAAAAAAAAAUUCAACUACAAAGUUGUAGACCGUGUCAAGGGCUACAAAUUUGAUAUAAUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK287603.1	ncRNA:24   GUAAUAUAGUUUAAACAUCGGGAA   1   |||*||||*||||||||||||=|| targets:1687   CAUAAUAUGAAAUUUGUAGCCUUU   1710 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J065054C11, full insert sequence	NA	coding protein	psRNATarget
AK288437.1	ncRNA:24   GUAAUAUAGUUUAAACAUCGGGAA   1   |*||||||||||*||||||||||* targets:1226   CUUUAUAUCAAACUUGUAGCCCUC   1249 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090034B12, full insert sequence	NA	coding protein	psRNATarget
JB164148.1	ncRNA:20   UAUAGUUUAAACAUCGGGAA   1   ||||||||*||||||||||* targets:1   AUAUCAAAAUUGUAGCCCUC   20 Target Full Sequence	2.5	Sequence 1812 from Patent EP2559767	NA	coding protein	psRNATarget
HI403687.1	ncRNA:20   UAUAGUUUAAACAUCGGGAA   1   ||||||||*||||||||||* targets:1   AUAUCAAAAUUGUAGCCCUC   20 Target Full Sequence	2.5	Sequence 1812 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235817.1	ncRNA:20   UAUAGUUUAAACAUCGGGAA   1   ||||||||*||||||||||* targets:1   AUAUCAAAAUUGUAGCCCUC   20 Target Full Sequence	2.5	Sequence 1812 from Patent EP2985353	NA	coding protein	psRNATarget