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BaseInfo

ncRNA ID	novel_osa_miR1928
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:19481404-19481540 [-]
Reference genome	IRGSP-1.0
Source	SRR1555746;SRR2097778;SRR1555751;SRR2099568;SRR2099745;SRR1556014;SRR4407955;SRR4407957;SRR4407960;SRR1556018
Length	24
Mature sequence(if miRNA)	114 - AACACUGGACUAAUUCACGAGACG - 137
Stem-loop(if miRNA)	--   A  G   U   UC           C A     C            CG     CCU    GAUGC   AAC CU GAC AAU  ACGAGACGAAU U UUGAG CUAAUUAAUCCA  AUUAG   AUGU     U   ||| || ||| |||  ||||||||||| | ||||| ||||||||||||  |||||   ||||     A   UUG GG CUG UUA  UGCUCUGUUUA A AAUUC GAUUAAUUAGGU  UAAUC   UACA     C UA   -  A   -   GA           A A     A            AU     UCU    AAUAA
Stem-loop sequence	AACACUGGACUAAUUCACGAGACGAAUCUAUUGAGCCUAAUUAAUCCACGAUUAGCCUAUGUGAUGCUACAAUAAACAUUCUCUAAUUAUGGAUUAAUUAGACUUAAAAAAUUUGUCUCGUAGAUUGUCAGGGUUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015794883.1	ncRNA:24   GCAGAGCACUUAAUCAGGUCACAA   1   |||||||*||||||||||||*||| targets:106   CGUCUCGCGAAUUAGUCCAGGGUU   129 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107282066 (LOC107282066), mRNA	uncharacterized LOC107282066(LOC107282066)	coding protein	psRNATarget
XM_015778080.1	ncRNA:24   GCAGAGCACUUAAUCAGGUCACAA   1   ****|*||||||||||*||||||| targets:1507   AUGAUAGUGAAUUAGUGCAGUGUU   1530 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group transcription factor IBH1 (LOC4337280), mRNA	transcription factor IBH1(LOC4337280)	coding protein	psRNATarget
AK109923.1	ncRNA:24   GCAGAGCACUUAAUCAGGUCACAA   1   ****|*||||||||||*||||||| targets:1247   AUGAUAGUGAAUUAGUGCAGUGUU   1270 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-151-C02, full insert sequence	NA	coding protein	psRNATarget