ncRNA ID | novel_osa_miR1926 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr9:1465321-1465427 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1743006 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUGCGAGAUGUAUAAGUUGAAUUU - 24 |
Stem-loop(if miRNA) |
--         C            A          CAAAUUU     -AAUAU  G   AUUCAACUU UACAUCUCGCAA GAAAAAAAAA       GACUG      GU U   ||||||||| |||||||||||| ||||||||||       |||||      ||   UAAGUUGAA AUGUAGAGCGUU CUUUUUUUUU       UUGAU      CA U UU         U            G          ----AAU     GUCGAU  A |
Stem-loop sequence | AUUCAACUUCUACAUCUCGCAAAGAAAAAAAAACAAAUUUGACUGAAUAUGUGUUAACUAGCUGUAGUUUAAUUUUUUUUUCGUUGCGAGAUGUAUAAGUUGAAUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015793191.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group probable receptor-like protein kinase At1g67000 (LOC4327950), transcript variant X1, mRNA | probable receptor-like protein kinase At1g67000(LOC4327950) | coding protein | psRNATarget | |||||||||
XM_015793197.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group probable receptor-like protein kinase At1g67000 (LOC4327950), transcript variant X2, mRNA | probable receptor-like protein kinase At1g67000(LOC4327950) | coding protein | psRNATarget | |||||||||
XM_015792915.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group UDP-glycosyltransferase 89B1 (LOC4345896), transcript variant X1, mRNA | UDP-glycosyltransferase 89B1(LOC4345896) | coding protein | psRNATarget |