ncRNA ID | novel_osa_miR1920 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr8:8253679-8253852 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1743006;SRR2040406 |
Length | 24 |
Mature sequence(if miRNA) | 151 - AUUUUCAUGCCAACGUUUGACUGU - 174 |
Stem-loop(if miRNA) |
--A     A  -                        A    UCUUUUU    AUUAGUAUUUUCAUUGUUGUUAGAUGAUAAAACGUG    UUUUC UG CCAACGUUUGACUGUCCGUCUUAU UGAA       UAUA                                    A    ||||| || |||||||||||||||||||||||| ||||       ||||    AAAGG AC GGUUGUAAAUUGGCAGGCAGAAUA ACUU       UACU                                    U AUC     C  A                        A    -UUUUUA    UUUUUUAAUUUUUCUAUUCAGUGCGUAUUUCAUAAU |
Stem-loop sequence | AUUUUCAUGCCAACGUUUGACUGUCCGUCUUAUAUGAAUCUUUUUUAUAAUUAGUAUUUUCAUUGUUGUUAGAUGAUAAAACGUGAUUAAUACUUUAUGCGUGACUUAUCUUUUUAAUUUUUUUCAUAUUUUUUUCAAAUAAGACGGACGGUUAAAUGUUGGACACGGAAACUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015772621.1 |
|
1.0 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4332894 (LOC4332894), mRNA | uncharacterized LOC4332894(LOC4332894) | coding protein | psRNATarget |