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BaseInfo

ncRNA ID	novel_osa_miR1913
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:8180752-8180816 [-]
Reference genome	IRGSP-1.0
Source	SRR1743006
Length	24
Mature sequence(if miRNA)	42 - GAUUUUGGUGGGAUGUGACACAUC - 65
Stem-loop(if miRNA)	--        U         CA         A   GAUUUUGG GGGAUGUGA  CAUCCUAGG U   |||||||| |||||||||  ||||||||| A   CUAAAACC UCCUACACU  GUAGGAUUC G CC        U         AC         U
Stem-loop sequence	GAUUUUGGUGGGAUGUGACACAUCCUAGGAUAGUCUUAGGAUGCAUCACAUCCUUCCAAAAUCCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015787746.1	ncRNA:24   CUACACAGUGUAGGGUGGUUUUAG   1   *||||||||||||||||||||||| targets:2302   AAUGUGUCACAUCCCACCAAAAUC   2325 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group protein ROOT PRIMORDIUM DEFECTIVE 1 (LOC4340709), mRNA	protein ROOT PRIMORDIUM DEFECTIVE 1(LOC4340709)	coding protein	psRNATarget
AK288631.1	ncRNA:24   CUACACAGUGUAGGGUGGUUUUAG   1   ||||||||||||||*||||||||| targets:1337   GAUGUGUCACAUCCAACCAAAAUC   1360 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090055C12, full insert sequence	NA	coding protein	psRNATarget
XM_015777085.1	ncRNA:24   CUACACAGUGUAGGGUGGUUUUAG   1   ||||||*|||||||*||||||||| targets:2954   GAUGUGACACAUCCAACCAAAAUC   2977 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group chromosome transmission fidelity protein 18 homolog (LOC4332344), transcript variant X2, mRNA	chromosome transmission fidelity protein 18 homolog(LOC4332344)	coding protein	psRNATarget
XM_015777084.1	ncRNA:24   CUACACAGUGUAGGGUGGUUUUAG   1   ||||||*|||||||*||||||||| targets:3038   GAUGUGACACAUCCAACCAAAAUC   3061 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group chromosome transmission fidelity protein 18 homolog (LOC4332344), transcript variant X1, mRNA	chromosome transmission fidelity protein 18 homolog(LOC4332344)	coding protein	psRNATarget
AK288214.1	ncRNA:24   CUACACAGUGUAGGGUGGUUUUAG   1   |||-||||=|||||||=||||||| targets:2450   GAU-UGUCGCAUCCCAUCAAAAUC   2472 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090010G11, full insert sequence	NA	coding protein	psRNATarget