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BaseInfo

ncRNA ID	novel_osa_miR1912
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:21311531-21311638 [-]
Reference genome	IRGSP-1.0
Source	SRR1555746;SRR1555747;SRR2097779;SRR2099567;SRR1555751;SRR1556011;SRR1556014;SRR1556018;SRR1556020
Length	24
Mature sequence(if miRNA)	1 - AUAUGGAAAAUGUUAGAAUGACUU - 24
Stem-loop(if miRNA)	--                   C    A        U    A        CAUAU   GUCAUUCUAGCAUUUUCCA AUUC UAUUGAUG UAAU AAUCUAGA     A   ||||||||||||||||||| |||| |||||||| |||| ||||||||   CAGUAAGAUUGUAAAAGGU UAAG AUAACUAC AUUA UUAGAUCU     U UU                   A    C        U    C        AUCUA
Stem-loop sequence	GUCAUUCUAGCAUUUUCCACAUUCAUAUUGAUGUUAAUAAAUCUAGACAUAUAUAUCUAUCUAGAUUCAUUAUCAUCAAUACGAAUAUGGAAAAUGUUAGAAUGACUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015793336.1	ncRNA:24   UUCAGUAAGAUUGUAAAAGGUAUA   1   ||||||||||||||||||=||||| targets:1561   AAGUCAUUCUAACAUUUUUCAUAU   1584 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group transcription factor bHLH112 (LOC9271688), transcript variant X3, mRNA	transcription factor bHLH112(LOC9271688)	coding protein	psRNATarget
XM_015793335.1	ncRNA:24   UUCAGUAAGAUUGUAAAAGGUAUA   1   ||||||||||||||||||=||||| targets:1714   AAGUCAUUCUAACAUUUUUCAUAU   1737 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group transcription factor bHLH112 (LOC9271688), transcript variant X2, mRNA	transcription factor bHLH112(LOC9271688)	coding protein	psRNATarget
XM_015793334.1	ncRNA:24   UUCAGUAAGAUUGUAAAAGGUAUA   1   ||||||||||||||||||=||||| targets:1732   AAGUCAUUCUAACAUUUUUCAUAU   1755 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group transcription factor bHLH112 (LOC9271688), transcript variant X1, mRNA	transcription factor bHLH112(LOC9271688)	coding protein	psRNATarget
XM_015756761.1	ncRNA:24   UUCAGUAAGAUUGUAAAAGGUAUA   1   |||||||||||=|||||||||||| targets:3350   AAGUCAUUCUAGCAUUUUCCAUAU   3373 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 (LOC4347249), mRNA	G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370(LOC4347249)	coding protein	psRNATarget
XM_015779859.1	ncRNA:24   UUCAGUAAGAUUGUAAAAGGUAUA   1   ||||||||=||=|||||||||||| targets:925   AAGUCAUUUUAGCAUUUUCCAUAU   948 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group formin-like protein 3 (LOC4335722), mRNA	formin-like protein 3(LOC4335722)	coding protein	psRNATarget
AK070890.1	ncRNA:24   UUCAGUAAGAUUGUAAAAGGUAUA   1   |||||||||||||||||||||*|| targets:907   AAGUCAUUCUAACAUUUUCCACAU   930 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023069D18, full insert sequence	NA	coding protein	psRNATarget
XM_015778215.1	ncRNA:24   UUCAGUAAGAUUGUAAAAGGUAUA   1   ||||=*||*||||||||||||||* targets:2273   AAGUUUUUGUAACAUUUUCCAUAA   2296 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group AP2-like ethylene-responsive transcription factor AIL5 (LOC4337245), mRNA	AP2-like ethylene-responsive transcription factor AIL5(LOC4337245)	coding protein	psRNATarget
AK106326.1	ncRNA:24   UUCAGUAAGAUUGUAAAAGGUAUA   1   |*||=|||*||||||||||*|||| targets:1809   AUGUUAUUAUAACAUUUUCGAUAU   1832 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-101-F02, full insert sequence	NA	coding protein	psRNATarget