ncRNA ID | novel_osa_miR1896 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr11:21528689-21528780 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1555746;SRR1555747;SRR1556014;SRR1556020 |
Length | 24 |
Mature sequence(if miRNA) | 69 - AAUGGACCGCACGCGAAAAUGAGC - 92 |
Stem-loop(if miRNA) |
--C                             C     G      C    CAUUUUUGCGUGCGGUCCAUUUAAGAGGA CGCAC AAAAAA C    ||||||||||||||||||||||||||||| ||||| ||||||    GUAAAAGCGCACGCCAGGUAAAUUCUCCU GCGUG UUUUUU A CGA                             A     G      A |
Stem-loop sequence | CCAUUUUUGCGUGCGGUCCAUUUAAGAGGACCGCACGAAAAAACCAAUUUUUUGGUGCGAUCCUCUUAAAUGGACCGCACGCGAAAAUGAGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK063216.1 |
|
2.0 | Oryza sativa Japonica Group cDNA clone:001-112-D12, full insert sequence | NA | coding protein | psRNATarget |