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BaseInfo

ncRNA ID novel_osa_miR1896
Species Oryza sativa
Class miRNA
Genome position Chr11:21528689-21528780 [+]
Reference genome IRGSP-1.0
Source SRR1555746;SRR1555747;SRR1556014;SRR1556020
Length 24
Mature sequence(if miRNA) 69 - AAUGGACCGCACGCGAAAAUGAGC - 92
Stem-loop(if miRNA) --C                             C     G      C
   CAUUUUUGCGUGCGGUCCAUUUAAGAGGA CGCAC AAAAAA C
   ||||||||||||||||||||||||||||| ||||| ||||||
   GUAAAAGCGCACGCCAGGUAAAUUCUCCU GCGUG UUUUUU A
CGA                             A     G      A
Stem-loop sequence CCAUUUUUGCGUGCGGUCCAUUUAAGAGGACCGCACGAAAAAACCAAUUUUUUGGUGCGAUCCUCUUAAAUGGACCGCACGCGAAAAUGAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK063216.1
ncRNA:24   CGAG-UAAAAGCGCACGCCAGGUAA   1
  **||-|||*||*|||||||||||||
targets:690   AAUCGAUUAUCCCGUGCGGUCCAUU   714

2.0 Oryza sativa Japonica Group cDNA clone:001-112-D12, full insert sequence NA coding protein psRNATarget