ncRNA ID | novel_osa_miR1890 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr4:4250050-4250100 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1743006;SRR1738241 |
Length | 24 |
Mature sequence(if miRNA) | 28 - AAGAACAACCGGGACUAAAGAUCU - 51 |
Stem-loop(if miRNA) |
--              C       C   AAGAACAACCGGGA UAAAGAU U   |||||||||||||| ||||||| U   UUCUUGUUGGCCCU AUUUCUA A CA              C       U |
Stem-loop sequence | AAGAACAACCGGGACUAAAGAUCUUAUAUCUUUACUCCCGGUUGUUCUUAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK288859.1 |
|
2.0 | Oryza sativa Japonica Group cDNA, clone: J090076J15, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK288544.1 |
|
2.0 | Oryza sativa Japonica Group cDNA, clone: J090046G24, full insert sequence | NA | coding protein | psRNATarget |