ncRNA ID | novel_osa_miR1883 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr4:25496335-25496410 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1743006 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UCUAACUUUUUUCAUCACAUC - 21 |
Stem-loop(if miRNA) |
UCUAACU      -                    CAU        UUUUUC AUCACAUCAAAACUUUCCUA   A        |||||| ||||||||||||||||||||   C        AAAAAG UAGUGUAGUUUUGAAAGGAU   A GAAAGUU      A                    UAG |
Stem-loop sequence | UCUAACUUUUUUCAUCACAUCAAAACUUUCCUACAUACAGAUUAGGAAAGUUUUGAUGUGAUAGAAAAAUUGAAAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015759918.1 |
|
2.0 | PREDICTED: Oryza sativa Japonica Group F-box/LRR-repeat protein At3g59190 (LOC9271146), mRNA | F-box/LRR-repeat protein At3g59190(LOC9271146) | coding protein | psRNATarget | |||||||||
CT835403.1 |
|
2.0 | Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA119N11, full insert sequence | NA | coding protein | psRNATarget |