ncRNA ID | novel_osa_miR1866 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr4:6210033-6210091 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1298758;SRR1300837 |
Length | 20 |
Mature sequence(if miRNA) | 1 - GAAGACGUCGUUCGGCCGAG - 20 |
Stem-loop(if miRNA) |
--G      -     AGG        U GAU    GGCCGA CGACG   UUCGGCCG G   G    |||||| |||||   |||||||| |    CCGGCU GCUGC   AAGCCGGC C   A GAG      U     -AG        - AGC |
Stem-loop sequence | GGGCCGACGACGAGGUUCGGCCGUGGAUGACGACCGGCCGAAGACGUCGUUCGGCCGAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015757068.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group ADP-ribosylation factor GTPase-activating protein AGD3 (LOC4347541), mRNA | ADP-ribosylation factor GTPase-activating protein AGD3(LOC4347541) | coding protein | psRNATarget | |||||||||
AK073117.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J033011K11, full insert sequence | NA | coding protein | psRNATarget |