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BaseInfo

ncRNA ID	novel_osa_miR1865
Species	Oryza sativa
Class	miRNA
Genome position	Chr2:9051001-9051194 [-]
Reference genome	IRGSP-1.0
Source	SRR1743006;SRR1849767;SRR1849771;SRR1849772;SRR2040388;SRR2040397;SRR2040404;SRR2040410;SRR3123645;SRR3123648;SRR1738226;SRR1738235
Length	22
Mature sequence(if miRNA)	173 - UUAAUGUAUGAUACCGUUGACU - 194
Stem-loop(if miRNA)	--           UA                C           ACUC             UU A    C        AAAUAGAACAU   A    AA   UUAAUGUAUGA  CCGUUGACUUUUUAAC AACGUUUGACC    GUCUUAUUCAAAA  U UAUG AAAUAUAA           UUG UGAU  A   |||||||||||  |||||||||||||||| |||||||||||    |||||||||||||  | |||| ||||||||           ||| ||||  U   AAUUACAUACU  GGCAACUGAAAAAUUG UUGCAAACUGG    CAGAAUAAGUUUU  A AUAC UUUAUAUU           AAC ACUG  U GA           GC                U           AAAA             UU A    A        --AAAUAAAAU   -    AA
Stem-loop sequence	UUAAUGUAUGAUACCGUUGACUUUUUAACCAACGUUUGACCACUCGUCUUAUUCAAAAUUUAUAUGCAAAUAUAAAAAUAGAACAUUUGAUGAUAAAUUAAGUCACAAUAAAAUAAAUUAUAUUUACAUAAAUUUUUUGAAUAAGACAAAAGGUCAAACGUUUGUUAAAAAGUCAACGGCGUCAUACAUUAAAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015779378.1	ncRNA:22   UCAGUUGCCAUAGUAUGUAAUU   1   ||||||||||=||||||||||| targets:11   AGUCAACGGUGUCAUACAUUAA   32 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group omega-hydroxypalmitate O-feruloyl transferase (LOC9266238), transcript variant X1, mRNA	omega-hydroxypalmitate O-feruloyl transferase(LOC9266238)	coding protein	psRNATarget
AK099749.1	ncRNA:22   UCAGUUGCCAUAGUAUGUAAUU   1   |*||||||||=||||||||||| targets:87   AAUCAACGGUGUCAUACAUUAA   108 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013091P17, full insert sequence	NA	coding protein	psRNATarget
XM_015779878.1	ncRNA:22   UCAGUUGCCAUAGUAUGUAAUU   1   |*||||||||=||||||||||| targets:360   AAUCAACGGUGUCAUACAUUAA   381 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group AT-hook motif nuclear-localized protein 9 (LOC4337449), mRNA	AT-hook motif nuclear-localized protein 9(LOC4337449)	coding protein	psRNATarget
AK288429.1	ncRNA:22   UCAGUUGCCAUAGUAUGUAAUU   1   |*|=||||||=||||||||||| targets:3465   AUUUAACGGUGUCAUACAUUAA   3486 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090033C09, full insert sequence	NA	coding protein	psRNATarget