ncRNA ID | novel_osa_miR1861 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr11:20549590-20549643 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1555746;SRR1555747;SRR1555751;SRR2099567;SRR2099745;SRR1556014;SRR4407953;SRR1556018;SRR1556020 |
Length | 24 |
Mature sequence(if miRNA) | 31 - AUACGGAAAAUGCUAGAAUGACUU - 54 |
Stem-loop(if miRNA) |
--A     A           AC   UA    UUAUU UAGUAUUUUUC  AUU  U    ||||| |||||||||||  |||    AGUAA AUCGUAAAAGG  UAG  A UUC     G           CA   UU |
Stem-loop sequence | AUUAUUAUAGUAUUUUUCACAUUUAUAUUGAUACGGAAAAUGCUAGAAUGACUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015756761.1 |
|
1.5 | PREDICTED: Oryza sativa Japonica Group G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 (LOC4347249), mRNA | G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370(LOC4347249) | coding protein | psRNATarget | |||||||||
XM_015779859.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group formin-like protein 3 (LOC4335722), mRNA | formin-like protein 3(LOC4335722) | coding protein | psRNATarget |