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BaseInfo

ncRNA ID	novel_osa_miR1858
Species	Oryza sativa
Class	miRNA
Genome position	Chr2:18008663-18008723 [+]
Reference genome	IRGSP-1.0
Source	SRR1743006;SRR2040391;SRR2040398
Length	24
Mature sequence(if miRNA)	1 - AGUUACACUGUAGUUAUAUGCAAG - 24
Stem-loop(if miRNA)	--             -  A    CA         AGUUACACUGUAG UU UAUG  AGUUACA   ||||||||||||| || ||||  ||||||G   UUAAUGUGACAUU AA AUAC  UUAAUGA UA             G  C    -A
Stem-loop sequence	AGUUACACUGUAGUUAUAUGCAAGUUACAGAGUAAUUACAUACAAGUUACAGUGUAAUUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK064819.1	ncRNA:24   GAACGUAUAUUGAUGUCACAUUGA   1   |||*|||||||||||||||||||| targets:659   CUUACAUAUAACUACAGUGUAACU   682 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:J013000E21, full insert sequence	NA	coding protein	psRNATarget
AK288324.1	ncRNA:24   GAACGUAUAUUGAUGUCACAUUGA   1   |||||||=||||||||||*||||| targets:2199   CUUGCAUGUAACUACAGUAUAACU   2222 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090022F09, full insert sequence	NA	coding protein	psRNATarget
XM_015791443.1	ncRNA:24   GAACGUAUAUUGAUGUCACAUUGA   1   *****||=|||=|||||||||||| targets:471   AAAUAAUGUAAUUACAGUGUAACU   494 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group COBRA-like protein 6 (LOC4343845), mRNA	COBRA-like protein 6(LOC4343845)	coding protein	psRNATarget