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BaseInfo

ncRNA ID novel_osa_miR1855
Species Oryza sativa
Class miRNA
Genome position Chr2:8804394-8804467 [+]
Reference genome IRGSP-1.0
Source SRR1743006;SRR3123630;SRR1738225
Length 24
Mature sequence(if miRNA) 1 - AGAAAUACCAUUGUCGUUAGGGUU - 24
Stem-loop(if miRNA) --                          AUCCAUCCC
  AGAAAUACCAUUGUCGUUAGGGUUCC         A
  ||||||||||||||||||||||||||
  UCUUUAUGGUAGCGGCAAUUCCAAGG         C
GG                          CAAUUGCCG
Stem-loop sequence AGAAAUACCAUUGUCGUUAGGGUUCCAUCCAUCCCACGCCGUUAACGGAACCUUAACGGCGAUGGUAUUUCUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK070866.1
ncRNA:24   UUGG---------GAUUGCUGUUACCAUAAAGA   1
  ||=|---------=|=|||||=|||||||||||
targets:466   AAUCAACGGUAGAUUGACGACGAUGGUAUUUCU   498

2.5 Oryza sativa Japonica Group cDNA clone:J023072D10, full insert sequence NA coding protein psRNATarget