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BaseInfo

ncRNA ID novel_osa_miR1854
Species Oryza sativa
Class miRNA
Genome position Chr11:20509712-20509866 [+]
Reference genome IRGSP-1.0
Source SRR1555746;SRR1556014
Length 24
Mature sequence(if miRNA) 132 - AGGUAUUUUUUUGUUGGACCGGAG - 155
Stem-loop(if miRNA) --         -       -    C      A       --UCA  AUACCAAAUCGUUUCUGAUCGUUGGAUCUAACA
  CCGGUCUAA AAAAAGG AUCU GAGGUA CGGUACC     UG                                 A
  ||||||||| ||||||| |||| |||||| |||||||     ||                                 U
  GGCCAGGUU UUUUUUU UGGA CUCUAU GCCAUGG     CA                                 A
GA         G       A    A      G       UUUAA  AAAACUAGCAACCUAGAUCGACUCGUACUACUC
Stem-loop sequence CCGGUCUAAAAAAAGGAUCUCGAGGUAACGGUACCUCAUGAUACCAAAUCGUUUCUGAUCGUUGGAUCUAACAAUACUCAUCAUGCUCAGCUAGAUCCAACGAUCAAAAACAAUUUGGUACCGGUAUCUCAAGGUAUUUUUUUGUUGGACCGGAG