ncRNA ID | novel_osa_miR1854 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr11:20509712-20509866 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1555746;SRR1556014 |
Length | 24 |
Mature sequence(if miRNA) | 132 - AGGUAUUUUUUUGUUGGACCGGAG - 155 |
Stem-loop(if miRNA) |
--         -       -    C      A       --UCA  AUACCAAAUCGUUUCUGAUCGUUGGAUCUAACA   CCGGUCUAA AAAAAGG AUCU GAGGUA CGGUACC     UG                                 A   ||||||||| ||||||| |||| |||||| |||||||     ||                                 U   GGCCAGGUU UUUUUUU UGGA CUCUAU GCCAUGG     CA                                 A GA         G       A    A      G       UUUAA  AAAACUAGCAACCUAGAUCGACUCGUACUACUC |
Stem-loop sequence | CCGGUCUAAAAAAAGGAUCUCGAGGUAACGGUACCUCAUGAUACCAAAUCGUUUCUGAUCGUUGGAUCUAACAAUACUCAUCAUGCUCAGCUAGAUCCAACGAUCAAAAACAAUUUGGUACCGGUAUCUCAAGGUAUUUUUUUGUUGGACCGGAG |