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BaseInfo

ncRNA ID ahy-miR408-3p
Species Arachis hypogaea
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - AUGCACUGCCUCUUCCCUGGC - NA
Stem-loop(if miRNA) -----          U  CAA   A  -     C      A      A  GAACUA     AG   C
     GAAGAAGAGA GA   AGA CU GGGAA AGGCAG GCAUGA UG      UCAAU  ACA A
     |||||||||| ||   ||| || ||||| |||||| |||||| ||      |||||  ||| U
     CUUUUUCUUU CU   UCU GG CCCUU UCCGUC CGUACU GC      AGUUA  UGU U
UCUUC          -  --C   C  U     C      A      C  ------     CU   U
Stem-loop sequence GAAGAAGAGAUGACAAAGAACUGGGAACAGGCAGAGCAUGAAUGGAACUAUCAAUAGACACAUUUUGUUCAUUGACGCUCAUGCACUGCCUCUUCCCUGGCUCUCUCUUUCUUUUUCCUUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ732358.1
ncRNA:21   AGUACGAGACGGACAAGGGUC   1
  |||||||||||||||||||||
targets:264   UCAUGCUCUGCCUGUUCCCAG   284

0.0 TSA: Arachis hypogaea CL1Contig11374.Arhy mRNA sequence NA coding protein psRNATarget

Reference

1 PMID:20047695
"Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)";
Zhao CZ, Xia H, Frazier TP, Yao YY, Bi YP, Li AQ, Li MJ, Li CS, Zhang BH, Wang XJ;
BMC Plant Biol. 10:3(2010).