ncRNA ID | ahy-miR408-3p |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - AUGCACUGCCUCUUCCCUGGC - NA |
Stem-loop(if miRNA) |
-----          U  CAA   A  -     C      A      A  GAACUA     AG   C      GAAGAAGAGA GA   AGA CU GGGAA AGGCAG GCAUGA UG      UCAAU  ACA A      |||||||||| ||   ||| || ||||| |||||| |||||| ||      |||||  ||| U      CUUUUUCUUU CU   UCU GG CCCUU UCCGUC CGUACU GC      AGUUA  UGU U UCUUC          -  --C   C  U     C      A      C  ------     CU   U |
Stem-loop sequence | GAAGAAGAGAUGACAAAGAACUGGGAACAGGCAGAGCAUGAAUGGAACUAUCAAUAGACACAUUUUGUUCAUUGACGCUCAUGCACUGCCUCUUCCCUGGCUCUCUCUUUCUUUUUCCUUCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ732358.1 |
|
0.0 | TSA: Arachis hypogaea CL1Contig11374.Arhy mRNA sequence | NA | coding protein | psRNATarget |
1 | PMID:20047695
"Deep sequencing identifies novel and conserved microRNAs in peanuts (Arachis hypogaea L.)"; Zhao CZ, Xia H, Frazier TP, Yao YY, Bi YP, Li AQ, Li MJ, Li CS, Zhang BH, Wang XJ; BMC Plant Biol. 10:3(2010). |