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BaseInfo

ncRNA ID	novel_osa_miR1838
Species	Oryza sativa
Class	miRNA
Genome position	Chr1:23586569-23586658 [-]
Reference genome	IRGSP-1.0
Source	SRR1555746;SRR1555747;SRR2097778;SRR1555749;SRR2097779;SRR2098822;SRR2099567;SRR2099746;SRR1556014;SRR4407775;SRR4407779;SRR1556016;SRR1556020;SRR1654490
Length	24
Mature sequence(if miRNA)	67 - AUACAAGUAGAAACAAAAAUAACA - 90
Stem-loop(if miRNA)	--      GUA                    -GA   UGAAUAGA   AUACAA   GAAACAAAAAUAACAAAUUU   CUA        A   ||||||   ||||||||||||||||||||   |||        C   UAUGUU   UUUUGUUUUUAUUGUUUAAA   GCA        G AA      AAG                    AUG   CUAAAUGU
Stem-loop sequence	AUACAAGUAGAAACAAAAAUAACAAAUUUGACUAUGAAUAGAACGUGUAAAUCACGGUAAAAUUUGUUAUUUUUGUUUUGAAUUGUAUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
CT837957.1	ncRNA:24   ACAAUAAAAACAAAGAUGAACAUA   1   |*|||||||||||||||||||||| targets:1004   UAUUAUUUUUGUUUCUACUUGUAU   1027 Target Full Sequence	0.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA122O21, full insert sequence	NA	coding protein	psRNATarget
AK289092.1	ncRNA:24   ACAAUAAAAACAAAGAUGAACAUA   1   |*||=|||||||||||||||||=| targets:5159   UAUUGUUUUUGUUUCUACUUGUGU   5182 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090096B09, full insert sequence	NA	coding protein	psRNATarget
CT832160.1	ncRNA:24   ACAA----UAAAAACAAAGAUGAACAUA   1   ||||----||||||*|||||*||||||| targets:400   UGUUCUUGAUUUUUUUUUCUCCUUGUAU   427 Target Full Sequence	2.5	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRN132A04, full insert sequence	NA	coding protein	psRNATarget