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BaseInfo

ncRNA ID novel_osa_miR1837
Species Oryza sativa
Class miRNA
Genome position Chr11:1190394-1190455 [-]
Reference genome IRGSP-1.0
Source SRR1743006
Length 21
Mature sequence(if miRNA) 42 - UUGCCCGGAGGUCGUGUGCUC - 62
Stem-loop(if miRNA) --UUG  -        -G  UG     -   A
     CC CGGAGGUC  UG  CUCUU GCG G
     || ||||||||  ||  ||||| ||| C
     GG GCCUCCGG  GC  GGGAG CGU A
UGGAA  A        GA  GU     U   G
Stem-loop sequence UUGCCCGGAGGUCGUGUGCUCUUGCGAGCAGUGCUGAGGGUGCGAGGGCCUCCGAGGAAGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK106927.1
ncRNA:21   CUCGUGUGCUGGAGGCCCGUU   1
  ||||||||||||*||||||||
targets:1367   GAGCACACGACCCCCGGGCAA   1387

1.5 Oryza sativa Japonica Group cDNA clone:002-119-B11, full insert sequence NA coding protein psRNATarget