ncRNA ID | novel_osa_miR1834 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr11:19480162-19480254 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1555746;SRR2098560;SRR1555751;SRR2099745;SRR1556011;SRR1556014;SRR4407962;SRR1556018 |
Length | 20 |
Mature sequence(if miRNA) | 74 - CUUCGGGGGAGGAGAGAAGC - 93 |
Stem-loop(if miRNA) |
--A      U              A     ----UGG    -U     U    UCUCUC CUCCCUUGAAGGCU UCUCA       AGGU  UGAUG A    |||||| |||||||||||||| |||||       ||||  ||||| C    AGAGAG GAGGGGGCUUCCGA AGAGU       UCCG  GUUAC A CGA      -              A     CAAAGAA    UU     C |
Stem-loop sequence | AUCUCUCUCUCCCUUGAAGGCUAUCUCAUGGAGGUUUGAUGUACACCAUUGUUGCCUAAGAAACUGAGAAAGCCUUCGGGGGAGGAGAGAAGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK289065.1 |
|
2.0 | Oryza sativa Japonica Group cDNA, clone: J090093P18, full insert sequence | NA | coding protein | psRNATarget |