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BaseInfo

ncRNA ID novel_osa_miR1834
Species Oryza sativa
Class miRNA
Genome position Chr11:19480162-19480254 [+]
Reference genome IRGSP-1.0
Source SRR1555746;SRR2098560;SRR1555751;SRR2099745;SRR1556011;SRR1556014;SRR4407962;SRR1556018
Length 20
Mature sequence(if miRNA) 74 - CUUCGGGGGAGGAGAGAAGC - 93
Stem-loop(if miRNA) --A      U              A     ----UGG    -U     U
   UCUCUC CUCCCUUGAAGGCU UCUCA       AGGU  UGAUG A
   |||||| |||||||||||||| |||||       ||||  ||||| C
   AGAGAG GAGGGGGCUUCCGA AGAGU       UCCG  GUUAC A
CGA      -              A     CAAAGAA    UU     C
Stem-loop sequence AUCUCUCUCUCCCUUGAAGGCUAUCUCAUGGAGGUUUGAUGUACACCAUUGUUGCCUAAGAAACUGAGAAAGCCUUCGGGGGAGGAGAGAAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK289065.1
ncRNA:20   CGAAG-AGAGGAGGGGGCUUC   1
  *||||-|||||||||||||||
targets:1986   CCUUCAUCUCCUCCCCCGAAG   2006

2.0 Oryza sativa Japonica Group cDNA, clone: J090093P18, full insert sequence NA coding protein psRNATarget