ncRNA ID | novel_osa_miR1829 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr11:23634493-23634560 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1743006 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GUUGACCGCCGGCUGUGGGGUCGG - 24 |
Stem-loop(if miRNA) |
--    A        UGUG  GU  G G  GA  G   GUUG CCGCCGGC    GG  CG G GC  GC A   |||| ||||||||    ||  || | ||  ||   CGAC GGCGGCCG    UC  GC C CG  CG C GG    -        CGAA  UG  G G  -G  G |
Stem-loop sequence | GUUGACCGCCGGCUGUGGGGUCGGGGGCGAGCGACGGCGGCGCGCGGUCUAAGCGCCGGCGGCAGCGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK109971.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:002-159-C06, full insert sequence | NA | coding protein | psRNATarget |