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BaseInfo

ncRNA ID novel_osa_miR1808
Species Oryza sativa
Class miRNA
Genome position Chr8:22563247-22563313 [+]
Reference genome IRGSP-1.0
Source SRR1743002
Length 22
Mature sequence(if miRNA) 46 - UUUUUUAAUAGAACCGACACCU - 67
Stem-loop(if miRNA) --            AA              ACU
  GUGUCGGUUCUA  GAAAAACCGGUACC   A
  ||||||||||||  ||||||||||||||   C
  CACAGCCAAGAU  UUUUUUGGCCGUGG   U
UC            AA              AUA
Stem-loop sequence GUGUCGGUUCUAAAGAAAAACCGGUACCACUACUAUAGGUGCCGGUUUUUUAAUAGAACCGACACCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK289022.1
ncRNA:22   UCCACAGCCAAGAUAAUUUUUU   1
  ||||||||*|||||||||||||
targets:1328   AGGUGUCGAUUCUAUUAAAAAA   1349

1.0 Oryza sativa Japonica Group cDNA, clone: J090090G17, full insert sequence NA coding protein psRNATarget