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BaseInfo

ncRNA ID	novel_osa_miR1806
Species	Oryza sativa
Class	miRNA
Genome position	Chr8:12863754-12863835 [+]
Reference genome	IRGSP-1.0
Source	SRR1743002
Length	24
Mature sequence(if miRNA)	1 - AAUACUACCUCUGUCCCAAAAAGA - 24
Stem-loop(if miRNA)	--AA                   A AA  UG       CUA     UACUACCUCUGUCCCAAAA G  UG  AUUCUGG   U     ||||||||||||||||||| |  ||  |||||||     AUGAUGGAGACAGGGUUUU C  AC  UAAGAUC   G UUAA                   C CC  GU       CAC
Stem-loop sequence	AAUACUACCUCUGUCCCAAAAAGAAUGUGAUUCUGGCUAUGCACCUAGAAUUGCACCCCUUUUGGGACAGAGGUAGUAAAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015776802.1	ncRNA:24   AGAAAAACCCUGUCUCCAUCAUAA   1   *=*||||||||||||||||||||* targets:1409   AUAUUUUGGGACAGAGGUAGUAUA   1432 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group xyloglucan galactosyltransferase KATAMARI1 homolog (LOC4331596), transcript variant X1, mRNA	xyloglucan galactosyltransferase KATAMARI1 homolog(LOC4331596)	coding protein	psRNATarget
AK068338.1	ncRNA:24   AGAAAAACCCUGUCUCCAUCAUAA   1   |*|||*||||||=||||||||||| targets:1058   UAUUUAUGGGACGGAGGUAGUAUU   1081 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013147B22, full insert sequence	NA	coding protein	psRNATarget
XM_015788628.1	ncRNA:24   AGAAAAACCCUGUCUCCAUCAUAA   1   |=*|||||||||||||||||||** targets:28   UUAUUUUGGGACAGAGGUAGUACA   51 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group protein trichome birefringence-like 24 (LOC4341180), mRNA	protein trichome birefringence-like 24(LOC4341180)	coding protein	psRNATarget
AK241490.1	ncRNA:24   AGAAAAACCCUGUCUCCAUCAUAA   1   *=*|||||||||=||||||||||* targets:1470   AUAUUUUGGGACGGAGGUAGUAUA   1493 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J065166P19, full insert sequence	NA	coding protein	psRNATarget
AK103056.1	ncRNA:24   AGAAAAACCCUGUCUCCAUCAUAA   1   *=*|||||||||=||||||||||* targets:3130   AUAUUUUGGGACGGAGGUAGUAUA   3153 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J033117K01, full insert sequence	NA	coding protein	psRNATarget
AK102017.1	ncRNA:24   AGAA-AAACCCUGUCUCCAUCAUAA   1   |||*-||||||||=||||||||||* targets:1093   UCUAAUUUGGGACGGAGGUAGUAUC   1117 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J033080F19, full insert sequence	NA	coding protein	psRNATarget
AK106501.1	ncRNA:24   AGA-AAAACCCUGUCUCCAUCAUAA   1   |=|-||||||||||||||*|||||* targets:564   UUUAUUUUGGGACAGAGGGAGUAUG   588 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-105-E11, full insert sequence	NA	coding protein	psRNATarget
AK102749.1	ncRNA:24   AGA-AAAACCCUGUCUCCAUCAUAA   1   |=|-||||||||||||||*|||||* targets:1894   UUUAUUUUGGGACAGAGGGAGUAUG   1918 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J033106K17, full insert sequence	NA	coding protein	psRNATarget
XM_015792273.1	ncRNA:24   AGA-AAAACCCUGUCUCCAUCAUAA   1   |=|-||||||||||||||*|||||* targets:1844   UUUAUUUUGGGACAGAGGGAGUAUG   1868 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4343174 (LOC4343174), transcript variant X2, mRNA	uncharacterized LOC4343174(LOC4343174)	coding protein	psRNATarget
XM_015792272.1	ncRNA:24   AGA-AAAACCCUGUCUCCAUCAUAA   1   |=|-||||||||||||||*|||||* targets:1934   UUUAUUUUGGGACAGAGGGAGUAUG   1958 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4343174 (LOC4343174), transcript variant X1, mRNA	uncharacterized LOC4343174(LOC4343174)	coding protein	psRNATarget
AK100328.1	ncRNA:24   AGA-AAAACCCUGUCUCCAUCAUAA   1   |=|-||||||||||||||*|||||* targets:2245   UUUAUUUUGGGACAGAGGGAGUAUG   2269 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023080A02, full insert sequence	NA	coding protein	psRNATarget
AK107672.1	ncRNA:24   AGA---AAAACCCUGUCUCCAUCAUAA   1   *||---|||*|||||=||||||||||| targets:961   CCUAAAUUUAGGGACGGAGGUAGUAUU   987 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-131-H10, full insert sequence	NA	coding protein	psRNATarget
AK288218.1	ncRNA:24   AGAAAAACCCUGUCUCCAUCAUAA   1   |=*|*||||||||||||||||||* targets:242   UUAUCUUGGGACAGAGGUAGUAUA   265 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090011H04, full insert sequence	NA	coding protein	psRNATarget
AK106283.1	ncRNA:24   AGAAAAACCCUGUCUCCAUCAUAA   1   *=**||||||||||||||||||** targets:3225   AUACUUUGGGACAGAGGUAGUACA   3248 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-101-A05, full insert sequence	NA	coding protein	psRNATarget