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BaseInfo

ncRNA ID	novel_osa_miR1797
Species	Oryza sativa
Class	miRNA
Genome position	Chr7:22143423-22143596 [-]
Reference genome	IRGSP-1.0
Source	SRR1743002;SRR2040382;SRR2040386;SRR2040390;SRR2040406
Length	24
Mature sequence(if miRNA)	151 - AUUUCUGUGUCCAACUUUAACUGU - 174
Stem-loop(if miRNA)	--A              -                  A     UUUUU    AAUUCGU   -UUCAUUGUU   AG   -         G    UUUCUGUGUCCAAC UUUAACUGUCCGUCUUAU UGAAA     UUAU       AUU          GUU  AUG AUAAAACAU A    |||||||||||||| |||||||||||||||||| |||||     ||||       |||          |||  ||| ||||||||| U    AAAGGCACAGGUUG AAAUUGGCAGGCAGAAUA AUUUU     AAUA       UAA          CAG  UGC UAUUUUGUA U ACC              C                  A     --UUU    CUUUUUU   UUUUUCUAUU   --   G         A
Stem-loop sequence	AUUUCUGUGUCCAACUUUAACUGUCCGUCUUAUAUGAAAUUUUUUUAUAAUUCGUAUUUUCAUUGUUGUUAGAUGAUAAAACAUGAUUAAUGUUUUAUGCGUGACUUAUCUUUUUAAUUUUUUUCAUAAUUUUUUUAAAUAAGACGGACGGUUAAACGUUGGACACGGAAACCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB164363.1	ncRNA:24   UGUCAAUUUCAACCUGUGUCUUUA   1   ||=*|||||||||||||||||||* targets:163   ACGAUUAAAGUUGGACACAGAAAC   186 Target Full Sequence	1.0	Sequence 2027 from Patent EP2559767	NA	coding protein	psRNATarget
LQ236032.1	ncRNA:24   UGUCAAUUUCAACCUGUGUCUUUA   1   ||=*|||||||||||||||||||* targets:163   ACGAUUAAAGUUGGACACAGAAAC   186 Target Full Sequence	1.0	Sequence 2027 from Patent EP2985353	NA	coding protein	psRNATarget
HI403902.1	ncRNA:24   UGUCAAUUUCAACCUGUGUCUUUA   1   ||=*|||||||||||||||||||* targets:163   ACGAUUAAAGUUGGACACAGAAAC   186 Target Full Sequence	1.0	Sequence 2027 from Patent EP2074227	NA	coding protein	psRNATarget
AK288606.1	ncRNA:24   UGUCAAUUUCAACCUGUGUCUUUA   1   ||=*|||||||||||||||||||* targets:4155   ACGAUUAAAGUUGGACACAGAAAC   4178 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090052P16, full insert sequence	NA	coding protein	psRNATarget
HI403580.1	ncRNA:24   UGUCAAUUUCAACCUGUGUCUUUA   1   ||=*|||||*|||||||||||||* targets:164   ACGAUUAAAAUUGGACACAGAAAC   187 Target Full Sequence	2.0	Sequence 1705 from Patent EP2074227	NA	coding protein	psRNATarget
JB164041.1	ncRNA:24   UGUCAAUUUCAACCUGUGUCUUUA   1   ||=*|||||*|||||||||||||* targets:164   ACGAUUAAAAUUGGACACAGAAAC   187 Target Full Sequence	2.0	Sequence 1705 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235710.1	ncRNA:24   UGUCAAUUUCAACCUGUGUCUUUA   1   ||=*|||||*|||||||||||||* targets:164   ACGAUUAAAAUUGGACACAGAAAC   187 Target Full Sequence	2.0	Sequence 1705 from Patent EP2985353	NA	coding protein	psRNATarget