| ncRNA ID | novel_osa_miR1792 |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr7:9166134-9166309 [+] |
| Reference genome | IRGSP-1.0 |
| Source | SRR1743002;SRR2040385;SRR2040387;SRR2040390;SRR2040396;SRR2040403;SRR2040408 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AGUUUUUGUUUGCAUUGUUUGACC - 24 |
| Stem-loop(if miRNA) |
-- CC -U -------------------UGCAAAUA A AAAAGUUGUUCUU AGUUUUUGUUUGCAUUGUUUGA ACUUGUCUUAUU AAAAAAUUUG UAA AACG A |||||||||||||||||||||| |||||||||||| |||||||||| ||| |||| A UCAAAAACGAACGUGGCAAACU UGAGCAGAAUAA UUUUUUAAAC AUG AAAU A AC AA UU CUUAAUAAUAAAUAAAAAAAACAGUGA - AAUAGGUUUCAUG |
| Stem-loop sequence | AGUUUUUGUUUGCAUUGUUUGACCACUUGUCUUAUUUAAAAAAUUUGUGCAAAUAUAAAAACGAAAAGUUGUUCUUAAAGUACUUUGGAUAAUAAAGUAAGUGACAAAAAAAAUAAAUAAUAAUUCCAAAUUUUUUUUAAUAAGACGAGUAAUCAAACGGUGCAAGCAAAAACUCA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CT837708.1 |
|
2.5 | Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA220M04, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| AK288977.1 |
|
1.5 | Oryza sativa Japonica Group cDNA, clone: J090085K17, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| AK288846.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J090075E22, full insert sequence | NA | coding protein | psRNATarget |