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BaseInfo

ncRNA ID novel_osa_miR1757
Species Oryza sativa
Class miRNA
Genome position Chr4:30713811-30713876 [+]
Reference genome IRGSP-1.0
Source SRR1743002;SRR2040386;SRR2040388;SRR2040390;SRR2040393;SRR2040396;SRR2040403;SRR2040410;SRR2098560;SRR5351739;SRR5351740;SRR1738217
Length 24
Mature sequence(if miRNA) 1 - UAUAGGUCAAAUUAGUAAGUAACC - 24
Stem-loop(if miRNA) --       C        A        A  A U
  UAUAGGU AAAUUAGU AGUAACCC CG G C
  ||||||| |||||||| |||||||| || |
  AUAUCCG UUUAAUCA UCAUUGGG GC C A
AA       U        C        C  C A
Stem-loop sequence UAUAGGUCAAAUUAGUAAGUAACCCACGAGUCAACCCGCGGGUUACUCACUAAUUUUGCCUAUAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
CT835664.1
ncRNA:24   CCAAUGAAUGAUUAAACUGGAUAU   1
  *|||-|||*||||||||||*||||
targets:944   AGUU-CUUCCUAAUUUGACAUAUA   966

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA108E04, full insert sequence NA coding protein psRNATarget