ncRNA ID | novel_osa_miR1757 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr4:30713811-30713876 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1743002;SRR2040386;SRR2040388;SRR2040390;SRR2040393;SRR2040396;SRR2040403;SRR2040410;SRR2098560;SRR5351739;SRR5351740;SRR1738217 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UAUAGGUCAAAUUAGUAAGUAACC - 24 |
Stem-loop(if miRNA) |
--       C        A        A  A U   UAUAGGU AAAUUAGU AGUAACCC CG G C   ||||||| |||||||| |||||||| || |   AUAUCCG UUUAAUCA UCAUUGGG GC C A AA       U        C        C  C A |
Stem-loop sequence | UAUAGGUCAAAUUAGUAAGUAACCCACGAGUCAACCCGCGGGUUACUCACUAAUUUUGCCUAUAAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CT835664.1 |
|
2.5 | Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA108E04, full insert sequence | NA | coding protein | psRNATarget |