ncRNA ID | novel_osa_miR1749 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr4:16358442-16358543 [+] |
Reference genome | IRGSP-1.0 |
Source | SRR1743002 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UUUUUUAAUAGAACCGACACCU - 22 |
Stem-loop(if miRNA) |
--            A          CU           G         CUA   UUUUUUAAUAGA CCGACACCUA  CUUAUAUUAUA GUGUCGGUU   A   |||||||||||| ||||||||||  ||||||||||| |||||||||   AAAAAGUUGUCU GGCUGUGGAU  GAAUAUAAUAU CACGGUCAA   A CC            C          AC           A         AAG |
Stem-loop sequence | UUUUUUAAUAGAACCGACACCUACUCUUAUAUUAUAGGUGUCGGUUCUAAAGAAAACUGGCACAUAUAAUAUAAGCAUAGGUGUCGGCUCUGUUGAAAAACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK289022.1 |
|
1.0 | Oryza sativa Japonica Group cDNA, clone: J090090G17, full insert sequence | NA | coding protein | psRNATarget |