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BaseInfo

ncRNA ID novel_osa_miR1749
Species Oryza sativa
Class miRNA
Genome position Chr4:16358442-16358543 [+]
Reference genome IRGSP-1.0
Source SRR1743002
Length 22
Mature sequence(if miRNA) 1 - UUUUUUAAUAGAACCGACACCU - 22
Stem-loop(if miRNA) --            A          CU           G         CUA
  UUUUUUAAUAGA CCGACACCUA  CUUAUAUUAUA GUGUCGGUU   A
  |||||||||||| ||||||||||  ||||||||||| |||||||||
  AAAAAGUUGUCU GGCUGUGGAU  GAAUAUAAUAU CACGGUCAA   A
CC            C          AC           A         AAG
Stem-loop sequence UUUUUUAAUAGAACCGACACCUACUCUUAUAUUAUAGGUGUCGGUUCUAAAGAAAACUGGCACAUAUAAUAUAAGCAUAGGUGUCGGCUCUGUUGAAAAACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK289022.1
ncRNA:22   UCCACAGCCAAGAUAAUUUUUU   1
  ||||||||*|||||||||||||
targets:1328   AGGUGUCGAUUCUAUUAAAAAA   1349

1.0 Oryza sativa Japonica Group cDNA, clone: J090090G17, full insert sequence NA coding protein psRNATarget