ncRNA ID | novel_osa_miR1747 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr1:28838116-28838220 [-] |
Reference genome | IRGSP-1.0 |
Source | SRR1555746;SRR2097778;SRR2097779;SRR2098823;SRR2099567;SRR2099745;SRR2099746;SRR1556014 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UACAACUUAUAGAAGUCGAAU - 21 |
Stem-loop(if miRNA) |
--          C    C      A                 G   AUAU  G   UCGACUUCUA AAGU GUAACA AAAUAACAAAUUGGACU UGA    GU U   |||||||||| |||| |||||| ||||||||||||||||| |||    ||   AGCUGAAGAU UUCA CAUUGU UUUAUUGUUUAAUUUGA AUU    CA A UA          A    A      C                 G   -GAU  U |
Stem-loop sequence | UCGACUUCUACAAGUCGUAACAAAAAUAACAAAUUGGACUGUGAAUAUGUGUAUACUAGUUAGAGUUUAAUUUGUUAUUUCUGUUACAACUUAUAGAAGUCGAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015788270.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group ABC transporter G family member 28 (LOC4342153), transcript variant X1, mRNA | ABC transporter G family member 28(LOC4342153) | coding protein | psRNATarget | |||||||||
XM_015788271.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group ABC transporter G family member 28 (LOC4342153), transcript variant X2, mRNA | ABC transporter G family member 28(LOC4342153) | coding protein | psRNATarget |