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BaseInfo

ncRNA ID	novel_osa_miR1736
Species	Oryza sativa
Class	miRNA
Genome position	Chr11:14481147-14481346 [+]
Reference genome	IRGSP-1.0
Source	SRR1555746;SRR1556014
Length	19
Mature sequence(if miRNA)	182 - GUUGAGGGCUACAAGUUUG - 200
Stem-loop(if miRNA)	--AAA                  CC                  ------------------------A      UGAAUUAAAACUGUUUAGGGUCCCAAAAUAUUGUUGCA      UUGUAGCUCUCGACGCGA  UACAACUUUGUAGUUGAA                         AGUUUU                                      U      ||||||||||||||||||  ||||||||||||||||||                         ||||||      AACAUCGGGAGUUGCGCU  AUGUUGAAACAUCAACUU                         CAGGGU                                      G GUUUG                  AA                  AAAAAAAAUAAAAUUCAGUAAAAAA      UUUACAUUAAAAUUUUAGUUUUAAAGUUUUAGAUAUUU
Stem-loop sequence	AAAUUGUAGCUCUCGACGCGACCUACAACUUUGUAGUUGAAAAGUUUUUGAAUUAAAACUGUUUAGGGUCCCAAAAUAUUGUUGCAUGUUUAUAGAUUUUGAAAUUUUGAUUUUAAAAUUACAUUUUGGGACAAAAAAUGACUUAAAAUAAAAAAAAUUCAACUACAAAGUUGUAAAUCGCGUUGAGGGCUACAAGUUUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288437.1	ncRNA:19   GUUUGAACAUCGGGAGUUG   1   ||||||||||||||||=|| targets:1234   CAAACUUGUAGCCCUCGAC   1252 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090034B12, full insert sequence	NA	coding protein	psRNATarget
HI404560.1	ncRNA:19   GUUUGAACAUCGGGAGUUG   1   ||||*|||||||||||=|| targets:3   CAAAAUUGUAGCCCUCGAC   21 Target Full Sequence	2.5	Sequence 2685 from Patent EP2074227	NA	coding protein	psRNATarget
JB165021.1	ncRNA:19   GUUUGAACAUCGGGAGUUG   1   ||||*|||||||||||=|| targets:3   CAAAAUUGUAGCCCUCGAC   21 Target Full Sequence	2.5	Sequence 2685 from Patent EP2559767	NA	coding protein	psRNATarget
LQ236690.1	ncRNA:19   GUUUGAACAUCGGGAGUUG   1   ||||*|||||||||||=|| targets:3   CAAAAUUGUAGCCCUCGAC   21 Target Full Sequence	2.5	Sequence 2685 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235817.1	ncRNA:19   GUUUGAACAUCGGGAGUUG   1   ||||*|||||||||||=|| targets:5   CAAAAUUGUAGCCCUCGAC   23 Target Full Sequence	2.5	Sequence 1812 from Patent EP2985353	NA	coding protein	psRNATarget
HI403687.1	ncRNA:19   GUUUGAACAUCGGGAGUUG   1   ||||*|||||||||||=|| targets:5   CAAAAUUGUAGCCCUCGAC   23 Target Full Sequence	2.5	Sequence 1812 from Patent EP2074227	NA	coding protein	psRNATarget
JB164148.1	ncRNA:19   GUUUGAACAUCGGGAGUUG   1   ||||*|||||||||||=|| targets:5   CAAAAUUGUAGCCCUCGAC   23 Target Full Sequence	2.5	Sequence 1812 from Patent EP2559767	NA	coding protein	psRNATarget