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BaseInfo

ncRNA ID	novel_osa_miR1734
Species	Oryza sativa
Class	miRNA
Genome position	Chr2:25999858-26000029 [-]
Reference genome	IRGSP-1.0
Source	SRR1743002;SRR2040389;SRR2040393;SRR2040396;SRR3123645;SRR1738226
Length	22
Mature sequence(if miRNA)	151 - UUUUUACUUAUACUGUUUGACC - 172
Stem-loop(if miRNA)	--     A   A                AUC     U         UUGCAAACAUAAAAAACAAAAGG  GUGCUUAAAGUACUUUGAAUAAUAAA   UUUUU CUU UACUGUUUGACCAUUC   UUAUU AGAAAAUUU                       UU                          G   ||||| ||| ||||||||||||||||   ||||| |||||||||                       ||   AAAAA GAA AUGACAAGCUGGUAAG   AAUAA UUUUUUAAA                       CU                          U CG     C   C                CAA     U         ----------------------C  UAAUAGUAAAGAAAAUAAACACUGAA
Stem-loop sequence	UUUUUACUUAUACUGUUUGACCAUUCAUCUUAUUUAGAAAAUUUUUGCAAACAUAAAAAACAAAAGGUUGUGCUUAAAGUACUUUGAAUAAUAAAGUAAGUCACAAAUAAAAGAAAUGAUAAUUCCAAAUUUUUUUAAUAAAACGAAUGGUCGAACAGUACAAGCAAAAAGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
CT833020.1	ncRNA:22   CCAGUUUGUCAUAUUCAUUUUU   1   |||=||||*||||||||||||* targets:1027   GGUUAAACCGUAUAAGUAAAAU   1048 Target Full Sequence	3.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN028E17, full insert sequence	NA	coding protein	psRNATarget
AK108588.1	ncRNA:22   CCAGUUUGUCAUAUUCAUUUUU   1   |||*||=*|||||||||||||| targets:1409   GGUAAAGAAGUAUAAGUAAAAA   1430 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:002-146-C05, full insert sequence	NA	coding protein	psRNATarget
XM_015785147.1	ncRNA:22   CCAGUUUGUCAUAUUCAUUUUU   1   **|=|*|||||||||||||||* targets:2591   AUUUAUACAGUAUAAGUAAAAU   2612 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group protein transport protein sec24 (LOC4338928), mRNA	protein transport protein sec24(LOC4338928)	coding protein	psRNATarget